| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AAAAATGTGG (2) TCTCCTTCCT (4)
| 13 | 0.013 |
| Cb medulloblastoma | AAAAATGTGG (2) TGTGAAAAAA (2)
| 13.8 | 0.0138 |
| P8 GC+1d culture | AAAAATGTGG (2) AGACTCTTTG AGTGACATCT (3) TGTGAAAAAA (2)
| 13.6 | 0.0136 |
| P8 GC+SHH+1d culture | AAAAATGTGG (2) TGTGAAAAAA (2)
| 7 | 0.007 |
| 3T3 fibroblasts | AGACTCTTTG TGTGAAAAAA (2)
| 7 | 0.007 |
| E15 cortex | AAAAATGTGG (2)
| 14.8 | 0.0148 |
| P1 cortex | AAAAATGTGG (2)
| 4.5 | 0.0045 |
| Hypothalamus | AAAAATGTGG (2)
| 1.8 | 0.0018 |
| E12.5 retina | AAAAATGTGG (2) TTATCTTTAA (2)
| 9.4 | 0.0094 |
| E14.5 retina | AAAAATGTGG (2) AGACTCTTTG TCTCCTTCCT (4)
| 7.2 | 0.0072 |
| E16.5 retina | AAAAATGTGG (2) TTATCTTTAA (2)
| 5.4 | 0.0054 |
| E18.5 retina | AAAAATGTGG (2) TGTGAAAAAA (2)
| 10.9 | 0.0109 |
| P0.5 retina | AAAAATGTGG (2) TTATCTTTAA (2)
| 9.9 | 0.0099 |
| P2.5 retina | AAAAATGTGG (2)
| 7 | 0.007 |
| P4.5 retina | AAAAATGTGG (2) TGTGAAAAAA (2) TTATCTTTAA (2)
| 27.7 | 0.0277 |
| P6.5 retina | AAAAATGTGG (2) AGTGACATCT (3) TGTGAAAAAA (2)
| 13.3 | 0.0133 |
| P10.5 crx- retina | AAAAATGTGG (2) AGACTCTTTG TGTGAAAAAA (2)
| 20.5 | 0.0205 |
| P10.5 crx+ retina | AAAAATGTGG (2) AGACTCTTTG AGTGACATCT (3) TGTGAAAAAA (2)
| 21.1 | 0.0211 |
| Adult retinal | AAAAATGTGG (2) AGTGACATCT (3) TGTGAAAAAA (2)
| 13.1 | 0.0131 |
| ONL | AAAAATGTGG (2) AGACTCTTTG AGTGACATCT (3)
| 17.2 | 0.0172 |