| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | CACACACACA (2) CTTGGAAGGC TGGGATCCCT (2)
| 16.3 | 0.0163 |
| Cb medulloblastoma | CACACACACA (2) CTTGGAAGGC GCAGAGGCAG TGGGATCCCT (2)
| 43.9 | 0.0439 |
| P8 GC+1d culture | CACACACACA (2) GCAGAGGCAG
| 7.9 | 0.0079 |
| P8 GC+SHH+1d culture | AAAAACATCT CACACACACA (2) GCAGAGGCAG TGGGATCCCT (2)
| 17.6 | 0.0176 |
| 3T3 fibroblasts | CACACACACA (2) CTTGGAAGGC
| 21 | 0.021 |
| E15 cortex | CACACACACA (2)
| 4.9 | 0.0049 |
| P1 cortex | CACACACACA (2)
| 27.3 | 0.0273 |
| Hypothalamus | CACACACACA (2) TGGGATCCCT (2)
| 97.8 | 0.0978 |
| E12.5 retina | CACACACACA (2) GCAGAGGCAG
| 5.7 | 0.0057 |
| E14.5 retina | CACACACACA (2) CTTGGAAGGC GCAGAGGCAG TGGGATCCCT (2)
| 23.6 | 0.0236 |
| E16.5 retina | AAAAACATCT CACACACACA (2) GCAGAGGCAG TCCTATAAGG
| 18.1 | 0.0181 |
| E18.5 retina | CACACACACA (2) GCAGAGGCAG
| 7.3 | 0.0073 |
| P0.5 retina | AAAAACATCT CACACACACA (2) GCAGAGGCAG TGGGATCCCT (2)
| 23.7 | 0.0237 |
| P2.5 retina | AAAAACATCT CACACACACA (2) GCAGAGGCAG
| 26.4 | 0.0264 |
| P4.5 retina | CACACACACA (2) TGGGATCCCT (2)
| 9.9 | 0.0099 |
| P6.5 retina | AAAAACATCT CACACACACA (2)
| 10 | 0.01 |
| P10.5 crx- retina | AAAAACATCT CACACACACA (2) TCCTATAAGG TGGGATCCCT (2)
| 15 | 0.015 |
| P10.5 crx+ retina | AAAAACATCT CACACACACA (2) GCAGAGGCAG
| 21.2 | 0.0212 |
| Adult retinal | CACACACACA (2)
| 16.7 | 0.0167 |
| ONL | AAAAACATCT CACACACACA (2) GCAGAGGCAG TCCTATAAGG
| 30.6 | 0.0306 |