| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | CCTTTGATCC (4) CTGGTGCACA
| 4.9 | 0.0049 |
| Cb medulloblastoma | AAAAAGGAAA CCTTTGATCC (4) TGTGGAACTA (2) TTTCCCCACA
| 11.5 | 0.0115 |
| P8 GC+1d culture | CCTTTGATCC (4) TCTGGATGCT TCTTTAATCC (2) TGTGGAACTA (2) TTTCCCCACA
| 6.7 | 0.0067 |
| P8 GC+SHH+1d culture | CCTTTGATCC (4) CTGGTGCACA TCTGGATGCT TCTTTAATCC (2) TGTGGAACTA (2) TTTCCCCACA
| 14.2 | 0.0142 |
| 3T3 fibroblasts | CTGGTGCACA TCTTTAATCC (2) TGGAAGGAAG
| 14 | 0.014 |
| E15 cortex | TCTTTAATCC (2) TGGAAGGAAG
| 14.8 | 0.0148 |
| P1 cortex | CCTTTGATCC (4) TCTTTAATCC (2)
| 22.7 | 0.0227 |
| Hypothalamus | TCTGGATGCT TTTCCCCACA
| 3.6 | 0.0036 |
| E12.5 retina | AAAAAGGAAA CCTTTGATCC (4) TTTCCCCACA
| 9.4 | 0.0094 |
| E14.5 retina | CCTTTGATCC (4) TCTTTAATCC (2)
| 23.7 | 0.0237 |
| E16.5 retina | CCTTTGATCC (4) TCTTTAATCC (2) TTTCCCCACA
| 14.5 | 0.0145 |
| E18.5 retina | CCTTTGATCC (4) TCTTTAATCC (2)
| 3.6 | 0.0036 |
| P0.5 retina | CCTTTGATCC (4) TCTTTAATCC (2)
| 4 | 0.004 |
| P2.5 retina | CCTTTGATCC (4) TCTTTAATCC (2) TTTCCCCACA
| 10.6 | 0.0106 |
| P4.5 retina | CCTTTGATCC (4) TCTTTAATCC (2) TTTCCCCACA
| 17.8 | 0.0178 |
| P6.5 retina | AAAAAGGAAA CCTTTGATCC (4)
| 5 | 0.005 |
| P10.5 crx- retina | TCTGGATGCT TCTTTAATCC (2)
| 3.8 | 0.0038 |
| P10.5 crx+ retina | CCTTTGATCC (4) TCTTTAATCC (2) TTTCCCCACA
| 11.5 | 0.0115 |
| Adult retinal | TCTTTAATCC (2)
| 7.4 | 0.0074 |
| ONL | AAAAAGGAAA CCTTTGATCC (4) TCTGGATGCT TCTTTAATCC (2) TTTCCCCACA
| 26.7 | 0.0267 |