Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.348219	Ccl21c	chemokine (C-C motif) ligand 21c (leucine)	4	4 13.34 cM	65956
Mm.348219	Ccl21a	chemokine (C-C motif) ligand 21a (leucine)	4	4 13.3 cM	20298
Gene Ontology	chemokine activity | chemotaxis | cytokine activity | extracellular | immune cell chemotaxis | immune response | inflammatory response | negative regulation of myeloid blood cell differentiation
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 20 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GCGCCCTCCC (3) 1.6 0.0016 P8 GC+1d culture CTGGCCTCCG (2) GCGCCCTCCC (3) 3.4 0.0034 P8 GC+SHH+1d culture GCGCCCTCCC (3) 1.2 0.0012 E15 cortex CTGGCCTCCG (2) GCGCCCTCCC (3) 14.8 0.0148 Hypothalamus CTGGCCTCCG (2) GCGCCCTCCC (3) 3.6 0.0036 E12.5 retina CTGGCCTCCG (2) GCGCCCTCCC (3) 5.7 0.0057 E14.5 retina CTGGCCTCCG (2) GCGCCCTCCC (3) 9.1 0.0091 E16.5 retina GCGCCCTCCC (3) 9.1 0.0091 E18.5 retina CTGGCCTCCG (2) GCGCCCTCCC (3) 5.4 0.0054 P2.5 retina CTGGCCTCCG (2) 3.5 0.0035 P4.5 retina CTGGCCTCCG (2) 2 0.002 P6.5 retina CTGGCCTCCG (2) 1.7 0.0017 P10.5 crx+ retina CTGGCCTCCG (2) 1.9 0.0019 Adult retinal GCGCCCTCCC (3) 1.9 0.0019