Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.348374	Grik3	glutamate receptor, ionotropic, kainate 3	4	4 57.2 cM	14807
Gene Ontology	alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective glutamate receptor activity | glutamate-gated ion channel activity | inotropic glutamate receptor activity | inotropic glutamate receptor activity | ionotropic glutamate receptor complex | membrane | membrane fraction | potassium channel activity | potassium ion transport | protein self binding | receptor activity | synaptic transmission | transport | transporter activity
Human Homolog	GRIK3[glutamate receptor, ionotropic, kainate 3]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 89 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ACCTCTCAGA CCCCTGGGGT CCCTGGGTTC GCCTCCTGGG (4) GCTGATCCGG 40.8 0.0408 Cb medulloblastoma ACCTCTCAGA CCCTGGGTTC GAGAAGAACC 9.2 0.0092 P8 GC+1d culture ACCTCTCAGA CAGATCCAAG CCCTGGGTTC CCTGGGTTCT GCCTCCTGGG (4) 129 0.129 P8 GC+SHH+1d culture ACCTCTCAGA CAGATCCAAG CCCCTGGGGT CCCTGGGTTC CCCTGGGTTT CCTGGGTTCT GAGAAGAACC GCCTCCTGGG (4) GCTGATCCGG 86.7 0.0867 3T3 fibroblasts ACCTCTCAGA CCCCTGGGGT CCCTGGGTTC CCCTGGGTTT GCCTCCTGGG (4) 736 0.736 E15 cortex CCCTGGGTTC GAGAAGAACC GCCTCCTGGG (4) 153.3 0.1533 P1 cortex CCCCTGGGGT CCCTGGGTTC CCCTGGTTCT 81.8 0.0818 Hypothalamus CCCTGGGTTC 5.4 0.0054 E12.5 retina ACCTCTCAGA CCCTGGGTTC GCCTCCTGGG (4) 50.8 0.0508 E14.5 retina ACCTCTCAGA CCCTGGGTTC CCCTGGGTTT GAGGAAGAAC GCCTCCTGGG (4) GCTGATCCGG 34.5 0.0345 E16.5 retina ACCTCTCAGA ATTACGCCAA CCCTGGGTTC CCCTGGTTCT GAGAAGAACC GCCTCCTGGG (4) GCTGATCCGG 68.7 0.0687 E18.5 retina ACCTCTCAGA CCCTGGGTTC GAGGAAGAAC 16.3 0.0163 P0.5 retina ACCTCTCAGA ATTACGCCAA CCCCTGGGGT CCCTGGGTTC CCCTGGGTTT GCCTCCTGGG (4) 102.1 0.1021 P2.5 retina CCCCTGGGGT CCCTGGGTTC GCCTCCTGGG (4) 19.4 0.0194 P4.5 retina ACCTCTCAGA CCCCTGGGGT CCCTGGGTTC CCCTGGGTTT GCTGATCCGG 41.7 0.0417 P6.5 retina ACCTCTCAGA CCCCTGGGGT CCCTGGGTTC CCCTGGTTCT CCTGGGTTCT GAGGAAGAAC GCCTCCTGGG (4) 60.1 0.0601 P10.5 crx- retina ACCTCTCAGA CCCTGGGTTC GCCTCCTGGG (4) GCTGATCCGG 107.7 0.1077 P10.5 crx+ retina CCCTGGGTTC CCTGGGTTCT GAGAAGAACC GCCTCCTGGG (4) 17.3 0.0173 Adult retinal ACCTCTCAGA ATTACGCCAA CCCCTGGGGT CCCTGGGTTC GCCTCCTGGG (4) 46.4 0.0464 ONL CCCTGGGTTC GCCTCCTGGG (4) 11.5 0.0115