Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.34855	4930509H03Rik	RIKEN cDNA 4930509H03 gene	3		75107
Mm.34855	A530041M06Rik	RIKEN cDNA A530041M06 gene	3		399576
Mm.34855	Lrig2	leucine-rich repeats and immunoglobulin-like domains 2	3	3 F2.2	269473
Human Homolog	LRIG2[leucine-rich repeats and immunoglobulin-like domains 2]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 8 In Situ Hybridization Images

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SAGE Tags

Total 66 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AGAAGGAAAA (4) TGTGTGTGTG (2) TGTTCGTCCT (3) TTAGGCAAGC TTTAAATAAA (2) 39 0.039 Cb medulloblastoma CTTTTTTTCA GCTTGCTCAG TGTGTGTGTG (2) 34.7 0.0347 P8 GC+1d culture CTCAGGGGAG (3) CTTTTTTTCA TGTGTGTGTG (2) TGTTCGTCCT (3) TTAGGCAAGC TTTAAATAAA (2) 41 0.041 P8 GC+SHH+1d culture CTTTTTTTCA TGTGTGTGTG (2) TGTTCGTCCT (3) TTAGGCAAGC 31.7 0.0317 3T3 fibroblasts TGTGTGTGTG (2) 28 0.028 E15 cortex CGCAGACAAG GCTTGCTCAG TGTTCGTCCT (3) 19.7 0.0197 P1 cortex TGTGTGTGTG (2) TTTAAATAAA (2) 22.7 0.0227 Hypothalamus TGTGTGTGTG (2) TGTTCGTCCT (3) 27.2 0.0272 E12.5 retina CGCAGACAAG GCTTGCTCAG TGTGTGTGTG (2) TGTTCGTCCT (3) 48.9 0.0489 E14.5 retina CTTTTTTTCA GCTTGCTCAG TGTGTGTGTG (2) 60.1 0.0601 E16.5 retina TGTGTGTGTG (2) TGTTCGTCCT (3) 41.6 0.0416 E18.5 retina TGTGTGTGTG (2) TGTTCGTCCT (3) 50.9 0.0509 P0.5 retina CGCAGACAAG TGTGTGTGTG (2) TGTTCGTCCT (3) 27.5 0.0275 P2.5 retina CTTTTTTTCA TGTGTGTGTG (2) TGTTCGTCCT (3) TTAGGCAAGC TTTAAATAAA (2) 44.1 0.0441 P4.5 retina TGTGTGTGTG (2) TGTTCGTCCT (3) TTTAAATAAA (2) 55.5 0.0555 P6.5 retina AGAAGGAAAA (4) CTCAGGGGAG (3) TGTGTGTGTG (2) TGTTCGTCCT (3) TTTAAATAAA (2) 55.1 0.0551 P10.5 crx- retina CTTTTTTTCA GCTTGCTCAG TGTGTGTGTG (2) TGTTCGTCCT (3) 66.9 0.0669 P10.5 crx+ retina CTCAGGGGAG (3) TGTGTGTGTG (2) TGTTCGTCCT (3) 59.6 0.0596 Adult retinal GCTTGCTCAG TGTGTGTGTG (2) TGTTCGTCCT (3) 66.7 0.0667 ONL GCTTGCTCAG TGTGTGTGTG (2) TGTTCGTCCT (3) 30.6 0.0306