| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | CACTGTGTGT (2) TTTTTTTTTT (2)
| 6.5 | 0.0065 |
| Cb medulloblastoma | TTTTTTTTTT (2)
| 2.3 | 0.0023 |
| P8 GC+1d culture | CACTGTGTGT (2) CCTCAGTTTA (3) TGGGGGTGGG (2) TTTCTGATAA (2) TTTCTGATAC (2) TTTTTTTTTT (2)
| 21.5 | 0.0215 |
| P8 GC+SHH+1d culture | TTTCTGATAA (2) TTTTTTTTTT (2)
| 8.2 | 0.0082 |
| E15 cortex | TTTTTTTTTT (2)
| 4.9 | 0.0049 |
| P1 cortex | TTTCTGATAC (2) TTTTTTTTTT (2)
| 9 | 0.009 |
| Hypothalamus | TTTTTTTTTT (2)
| 7.2 | 0.0072 |
| E12.5 retina | TTTTTTTTTT (2)
| 7.5 | 0.0075 |
| E14.5 retina | CACTGTGTGT (2) TTTCTGATAA (2) TTTCTGATAC (2) TTTTTTTTTT (2)
| 29.1 | 0.0291 |
| E16.5 retina | TTTCTGATAA (2) TTTCTGATAC (2) TTTTTTTTTT (2)
| 10.8 | 0.0108 |
| E18.5 retina | CCTCTGCTTT TTTTTTTTTT (2)
| 12.7 | 0.0127 |
| P0.5 retina | TTTCTGATAA (2) TTTTTTTTTT (2)
| 11.8 | 0.0118 |
| P2.5 retina | CCTCAGTTTA (3) TTTCTGATAA (2) TTTCTGATAC (2) TTTTTTTTTT (2)
| 14.1 | 0.0141 |
| P4.5 retina | CCTCAGTTTA (3) TTTCTGATAA (2) TTTCTGATAC (2) TTTTTTTTTT (2)
| 29.6 | 0.0296 |
| P6.5 retina | CCTCAGTTTA (3) TTTCTGATAA (2) TTTCTGATAC (2) TTTTTTTTTT (2)
| 18.3 | 0.0183 |
| P10.5 crx- retina | CCTCAGTTTA (3) TTTCTGATAA (2) TTTCTGATAC (2)
| 14.9 | 0.0149 |
| P10.5 crx+ retina | TGGGGGTGGG (2) TTTCTGATAC (2) TTTTTTTTTT (2)
| 13.4 | 0.0134 |
| Adult retinal | CCTCAGTTTA (3) CCTCTGCTTT TGGGGGTGGG (2) TTTCTGATAC (2) TTTTTTTTTT (2)
| 16.8 | 0.0168 |
| ONL | CCTCTGCTTT TTTCTGATAA (2) TTTCTGATAC (2) TTTTTTTTTT (2)
| 17.1 | 0.0171 |