| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AAAAAAAAAA (2) GCAGCCTGTG GGGAAATTAA (2) TACCAGCACA
| 212 | 0.212 |
| Cb medulloblastoma | AAAAAAAAAA (2) CTGGCGTGAG (2) TACCAGCACA
| 802.4 | 0.8024 |
| P8 GC+1d culture | AAAAAAAAAA (2) CTGGCGTGAG (2) TTAATGTACT
| 211.2 | 0.2112 |
| P8 GC+SHH+1d culture | AAAAAAAAAA (2) CTGGCGTGAG (2) GGGAAATTAA (2) TACCAGCACA
| 294 | 0.294 |
| 3T3 fibroblasts | AAAAAAAAAA (2) CTGGCGTGAG (2) TACCAGCACA
| 49 | 0.049 |
| E15 cortex | AAAAAAAAAA (2) CTGGCGTGAG (2) GCAGCCTGTG TACCAGCACA
| 227.5 | 0.2275 |
| P1 cortex | AAAAAAAAAA (2)
| 245.4 | 0.2454 |
| Hypothalamus | AAAAAAAAAA (2) CTGGCGTGAG (2) TACCAGCACA
| 128.6 | 0.1286 |
| E12.5 retina | AAAAAAAAAA (2) CTGGCGTGAG (2) GCAGCCTGTG TACCAGCACA
| 167.1 | 0.1671 |
| E14.5 retina | AAAAAAAAAA (2) CTGGCGTGAG (2) TACCAGCACA
| 114.7 | 0.1147 |
| E16.5 retina | AAAAAAAAAA (2) CTGGCGTGAG (2) TACCAGCACA TTAATGTACT
| 68.8 | 0.0688 |
| E18.5 retina | AAAAAAAAAA (2) CTGGCGTGAG (2) TACCAGCACA
| 389.2 | 0.3892 |
| P0.5 retina | AAAAAAAAAA (2) CTGGCGTGAG (2) GCAGCCTGTG TACCAGCACA TTAATGTACT
| 141.4 | 0.1414 |
| P2.5 retina | AAAAAAAAAA (2) CTGGCGTGAG (2) TACCAGCACA
| 341.5 | 0.3415 |
| P4.5 retina | AAAAAAAAAA (2) CTGGCGTGAG (2) TACCAGCACA
| 301.1 | 0.3011 |
| P6.5 retina | AAAAAAAAAA (2) CTGGCGTGAG (2) TACCAGCACA
| 288.4 | 0.2884 |
| P10.5 crx- retina | AAAAAAAAAA (2) CTGGCGTGAG (2) GGGAAATTAA (2) TTAATGTACT
| 66.9 | 0.0669 |
| P10.5 crx+ retina | AAAAAAAAAA (2) CTGGCGTGAG (2) GCAGCCTGTG TACCAGCACA
| 111.4 | 0.1114 |
| Adult retinal | AAAAAAAAAA (2) CTGGCGTGAG (2) TACCAGCACA TTAATGTACT
| 74.2 | 0.0742 |
| ONL | AAAAAAAAAA (2) CTGGCGTGAG (2) GCAGCCTGTG TTAATGTACT
| 112.9 | 0.1129 |