Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.3555	Vdac1	voltage-dependent anion channel 1	11	11 29.0 cM	22333
Gene Ontology	anion transport | behavioral fear response | extracellular space | integral to membrane | learning | mitochondrial outer membrane | mitochondrion | nerve-nerve synaptic transmission | outer membrane | porin activity | synaptic transmission | voltage-dependent ion-selective channel activity
Human Homolog	VDAC1[voltage-dependent anion channel 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 53 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CTAAAATCAA GGAAAAAAAA (2) TACACACCTG 18 0.018 Cb medulloblastoma GCCGTGCCTC GGAAAAAAAA (2) 43.9 0.0439 P8 GC+1d culture CTAAAATCAA GGAAAAAAAA (2) TACACACCTG 24 0.024 P8 GC+SHH+1d culture CTAAAATCAA GCCGTGCTCC GGAAAAAAAA (2) TACACACCTG 24.6 0.0246 3T3 fibroblasts GCCGTGCCTC TACACACCTG 28 0.028 E15 cortex GCCGTGCCTC GGAAAAAAAA (2) TACACACCTG 24.7 0.0247 P1 cortex GGAAAAAAAA (2) TACACACCTG 13.6 0.0136 Hypothalamus GGAAAAAAAA (2) TACACACCTG 23.6 0.0236 E12.5 retina GCCGTGCCTC GGAAAAAAAA (2) 3.8 0.0038 E14.5 retina GGAAAAAAAA (2) 10.9 0.0109 E16.5 retina GCCGTGCCTC GCCTGGAGGA GGAAAAAAAA (2) 7.2 0.0072 E18.5 retina GCCGTGCTCC GGAAAAAAAA (2) 18.2 0.0182 P0.5 retina CTAAAATCAA GCCTGGAGGA GGAAAAAAAA (2) TACACACCTG 23.6 0.0236 P2.5 retina CTAAAATCAA GGAAAAAAAA (2) TACACACCTG 14 0.014 P4.5 retina GCCGTGCCTC GCCGTGCTCC GGAAAAAAAA (2) TACACACCTG 23.9 0.0239 P6.5 retina CTAAAATCAA GCCGTGCCTC GGAAAAAAAA (2) TACACACCTG 25 0.025 P10.5 crx- retina CTAAAATCAA GGAAAAAAAA (2) 5.6 0.0056 P10.5 crx+ retina GGAAAAAAAA (2) TACACACCTG 25 0.025 Adult retinal GCCGTGCCTC GGAAAAAAAA (2) TACACACCTG 29.7 0.0297 ONL GGAAAAAAAA (2) TACACACCTG 21 0.021