Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.35732	5830411H19Rik	RIKEN cDNA 5830411H19 gene	11		76010
Mm.35732	Slc36a1	solute carrier family 36 (proton/amino acid symporter), member 1	11		215335
Gene Ontology	amino acid transport | amino acid transporter activity | amino acid-polyamine transporter activity | glycine transport | glycine transporter activity | hydrogen:amino acid symporter activity | integral to membrane | L-alanine transport | L-alanine transporter activity | L-proline transport | L-proline transporter activity | L-tyrosine transporter activity | lysosome | membrane | proton transport | symporter activity | transport
Human Homolog	SLC36A1[solute carrier family 36 (proton/amino acid symporter), member 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 54 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GGCTGGATTT TCAGAGCTTC (2) TGTGCTGGCA 14.7 0.0147 Cb medulloblastoma TCAGAGCTTC (2) TGTGCTGGCA 6.9 0.0069 P8 GC+1d culture GAGTGGGCTT GCAGAGACAT GGCTGGATTT TCAGAGCTTC (2) TGTGCTGGCA 12.4 0.0124 P8 GC+SHH+1d culture GAGTGGGCTT GCAGAGACAT GGCTGGATTT TCAGAGCTTC (2) TGGCTCATCT (4) TGTGCTGGCA 18.7 0.0187 3T3 fibroblasts GCAGAGACAT 10.5 0.0105 E15 cortex GAGTGGGCTT GGCTGGATTT 19.8 0.0198 P1 cortex GCAGAGACAT 9.1 0.0091 Hypothalamus GCAGAGACAT TGGCTCATCT (4) 3.6 0.0036 E12.5 retina GCAGAGACAT 13.1 0.0131 E14.5 retina GAGTGGGCTT GCAGAGACAT GGCTGGATTT 31 0.031 E16.5 retina GAGTGGGCTT GCAGAGACAT GGCTGGATTT TCAGAGCTTC (2) 57.9 0.0579 E18.5 retina GAGTGGGCTT GCAGAGACAT GGCTGGATTT TCAGAGCTTC (2) 7.2 0.0072 P2.5 retina GAGTGGGCTT GGCTGGATTT TGTGCTGGCA 7.1 0.0071 P4.5 retina GGCTGGATTT TCAGAGCTTC (2) TGGCTCATCT (4) 6 0.006 P6.5 retina GGCTGGATTT TCAGAGCTTC (2) 8.3 0.0083 P10.5 crx- retina GAGTGGGCTT GCAGAGACAT GGCTGGATTT 14.9 0.0149 P10.5 crx+ retina GCAGAGACAT GGCTGGATTT TCAGAGCTTC (2) 7.6 0.0076 Adult retinal GAGTGGGCTT GCAGAGACAT GGCTGGATTT TCAGAGCTTC (2) 11.2 0.0112 ONL GAGTGGGCTT GGCTGGATTT 5.7 0.0057