Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.3596	Cops2	COP9 (constitutive photomorphogenic) homolog, subunit 2 (Arabidopsis thaliana)	2	2 70.0 cM	12848
Gene Ontology	cell proliferation | negative regulation of transcription | nucleus | protein binding | receptor activity | signal transduction | signalosome complex | transcription corepressor activity | transcription from Pol II promoter
Human Homolog	TRIP15[thyroid receptor interacting protein 15]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 59 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ATTCCGAATT (2) CTTATTTGGT GTCTTTCTAC TATAAATGAA 9.7 0.0097 Cb medulloblastoma AATAAATGAA GTCTTTCTAC TAACTCTGGA 13.8 0.0138 P8 GC+1d culture GGTGTCATCA (2) GTCTTTCTAC TATAAATGAA 11.3 0.0113 P8 GC+SHH+1d culture ATTTTAAAAA (2) GTCTTTCTAC TATAAATGAA 7 0.007 3T3 fibroblasts TTGTACCTGC (2) 3.5 0.0035 E15 cortex TTGTACCTGC (2) 4.9 0.0049 P1 cortex AATAAATGAA GTCTTTCTAC TATAAATGAA 13.5 0.0135 Hypothalamus GTCTTTCTAC TAACTCTGGA TATAAATGAA TTGTACCTGC (2) 16.3 0.0163 E12.5 retina GTCTTTCTAC TAACTCTGGA TATAAATGAA 5.7 0.0057 E14.5 retina CTTATTTGGT GAAGACAAAG (2) GTCTTTCTAC TAACTCTGGA 10.9 0.0109 E16.5 retina GAAGACAAAG (2) GTCTTTCTAC TATAAATGAA TTGTACCTGC (2) 12.6 0.0126 E18.5 retina ATTTTAAAAA (2) GGTGTCATCA (2) GTCTTTCTAC TTGTACCTGC (2) 9 0.009 P0.5 retina CTTATTTGGT 3.9 0.0039 P2.5 retina CTTATTTGGT GTCTTTCTAC TAACTCTGGA TATAAATGAA TTGTACCTGC (2) 14.2 0.0142 P4.5 retina ATTCCGAATT (2) CTTATTTGGT GTCTTTCTAC TAACTCTGGA 13.9 0.0139 P6.5 retina AATAAATGAA ATTCCGAATT (2) CTTATTTGGT GGTGTCATCA (2) GTCTTTCTAC 10.1 0.0101 P10.5 crx- retina TATAAATGAA 1.9 0.0019 P10.5 crx+ retina GTCTTTCTAC TATAAATGAA 7.7 0.0077 Adult retinal TAACTCTGGA 1.9 0.0019 ONL ATTCCGAATT (2) GTCTTTCTAC TATAAATGAA 7.6 0.0076