Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.3619	Ctss	cathepsin S	3	3 42.7 cM	13040
Gene Ontology	cathepsin S activity | cathepsin S activity | cysteine-type endopeptidase activity | cysteine-type peptidase activity | extracellular space | hydrolase activity | lysosome | membrane | peptidase activity | proteolysis and peptidolysis
Human Homolog	CTSS[cathepsin S]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 23 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ATAGCCCCAA GATGACCCAG (2) 9.8 0.0098 Cb medulloblastoma ATAGCCCCAA 6.9 0.0069 P8 GC+1d culture ATAGCCCCAA TCTGCTTCTT (2) 5.7 0.0057 P8 GC+SHH+1d culture ATAGCCCCAA TCTGCTTCTT (2) 4.6 0.0046 3T3 fibroblasts GATGACCCAG (2) 10.5 0.0105 E15 cortex GATGACCCAG (2) TCTGCTTCTT (2) 19.8 0.0198 P1 cortex TCTGCTTCTT (2) 4.5 0.0045 Hypothalamus ATAGCCCCAA 18.1 0.0181 E12.5 retina GATGACCCAG (2) 1.9 0.0019 E16.5 retina ATAGCCCCAA 1.8 0.0018 P0.5 retina GATGACCCAG (2) 3.9 0.0039 P2.5 retina ATAGCCCCAA 1.8 0.0018 P4.5 retina ATAGCCCCAA 5.9 0.0059 P6.5 retina ATAGCCCCAA 8.3 0.0083 P10.5 crx- retina ATAGCCCCAA GATGACCCAG (2) TCTGCTTCTT (2) 11.2 0.0112 P10.5 crx+ retina ATAGCCCCAA 5.8 0.0058 Adult retinal GATGACCCAG (2) 1.9 0.0019