Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.3645	Myo5a	myosin Va	9	9 42.0 cM	17918
Gene Ontology	actin binding | actin binding | ATP binding | calmodulin binding | cytoskeleton organization and biogenesis | microfilament motor activity | motor activity | myosin | protein binding | vesicle transport along actin filament
Human Homolog	MYO5A[myosin VA (heavy polypeptide 12, myoxin)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 86 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ATAAACTTTT (2) TGCTCTGGAG TTGGTATTGT (2) TTTCCAAGGC 13 0.013 Cb medulloblastoma AGTTTTTCAC GCATTTAACA TGCTCTGGAG TTGGTATTGT (2) TTTCCAAGGC 13.8 0.0138 P8 GC+1d culture AGTTTTTCAC TGAGACATTT (3) TGCTCTGGAG TTGGGAGAGA TTGGTATTGT (2) 12.5 0.0125 P8 GC+SHH+1d culture AGTTTTTCAC ATAAACTTTT (2) TCAAACAGCT TGAGACATTT (3) TGATGTGTGA (4) TGCTCTGGAG TTGATATTGT TTGGTATTGT (2) 17.7 0.0177 3T3 fibroblasts TGCTCTGGAG TTGGTATTGT (2) 7 0.007 E15 cortex TGCTCTGGAG 4.9 0.0049 P1 cortex AGTTTTTCAC CATATATTCA GAGAAACTGA TGCTCTGGAG TTGGGAGAGA TTGGTATTGT (2) 63.5 0.0635 Hypothalamus AGTTTTTCAC GAGAAACTGA TGAGACATTT (3) TGCTCTGGAG TTGATATTGT TTGGGAGAGA TTTCCAAGGC 21.6 0.0216 E12.5 retina ATAAACTTTT (2) GCATTTAACA TTGGGAGAGA TTGGTATTGT (2) 11.3 0.0113 E14.5 retina ATAAACTTTT (2) TGATGTGTGA (4) TTGGGAGAGA 5.4 0.0054 E16.5 retina ATAAACTTTT (2) CATATATTCA TGAGACATTT (3) TTGATATTGT TTGGTATTGT (2) 9 0.009 E18.5 retina ATAAACTTTT (2) TCAAACAGCT TTGATATTGT 9.1 0.0091 P0.5 retina TGCTCTGGAG TTGGTATTGT (2) 4 0.004 P2.5 retina AGTTTTTCAC ATAAACTTTT (2) TGCTCTGGAG TTGATATTGT 10.7 0.0107 P4.5 retina ATAAACTTTT (2) GCATTTAACA TGCTCTGGAG TTGATATTGT TTGGGAGAGA 15.9 0.0159 P6.5 retina ATAAACTTTT (2) CATATATTCA TGCTCTGGAG TTGGGAGAGA 13.3 0.0133 P10.5 crx- retina AGTTTTTCAC ATAAACTTTT (2) TGATGTGTGA (4) TGCTCTGGAG 13.1 0.0131 P10.5 crx+ retina AGTTTTTCAC ATAAACTTTT (2) TGCTCTGGAG TTGGTATTGT (2) 25 0.025 Adult retinal AGTTTTTCAC CATATATTCA GAGAAACTGA TGCTCTGGAG TTGATATTGT TTGGTATTGT (2) 20.6 0.0206 ONL AGTTTTTCAC ATAAACTTTT (2) TCAAACAGCT TGCTCTGGAG 7.6 0.0076