Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.37214	Trf	transferrin	9	9 56.0 cM	22041
Gene Ontology	endocytic vesicle | extracellular | extracellular space | ferric iron binding | iron ion homeostasis | iron ion transport | transport
Human Homolog	TF[transferrin]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 340 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ACCTTTGGAA (3) ACTTTCCACA CCCTGAGGGG CCCTGAGGGT (3) CCTGAGGGTA CCTGGGGAAG CCTGTACAAC (2) CTGTACCACA (2) CTGTCAGTGG (2) GAAGGACAAA GAGGAAGTGG (2) GCAGAAAAAC (2) GCAGGGCCAC (2) GCGGGGACTT GGCCACGGGA (2) GGCCCAAGGC (2) GGCTTCTCTG (2) GGGATCAGTC (2) GGGCCCAGGC (2) GGGCTTCTCT GTGGGTCTCA GTTAGGGTAT TGGCTTGCTC (3) TGGGGAAGAA TGGTTGCTCT (2) 105.6 0.1056 Cb medulloblastoma AAGACCTGTC (2) AATTAAAACA ACCTTTGGAA (3) CCAGGGAAGA (2) CCCTGAGGGG CCCTGGAGGG CCTGTACAAC (2) GAATGGAAAC GAGAAGTGCT GCAGAAAAAC (2) GGCCACGGGA (2) GGCCCAAGGC (2) GGGCCCAGGC (2) GGGTGGCCCA TGGGAGTGTG TGGTTGCTCT (2) TTACGGAAAA 110.7 0.1107 P8 GC+1d culture AAGAAAACAG (3) AGGGAAGTGC (2) CCCTGAGGGG CCCTGAGGGT (3) CCTGGGGAAG CCTGTACAAA CTGTACCACA (2) CTGTCAGTGG (2) GAAGACTTGA GAGAAGTGCT GCAGGGCCAC (2) GGCCACGGGA (2) GGCCCAAGGC (2) GGGCCCAGGC (2) GGTGGCAGGA GTGGGTCTCA GTTTGGAGCT (4) TCACCGACAG TGGGGAAGAA 95.6 0.0956 P8 GC+SHH+1d culture AACAACACAG (2) ACTTTCCACA AGGGAAGTGC (2) CCAGGGAAGA (2) CCCTGAGGGG CCCTGAGGGT (3) CCTGGGGAAG CCTGTACAAC (2) CTGGTGTGGC (2) CTGTACCACA (2) CTGTCAGTGG (2) GAAGACTTGA GAAGGACAAA GAATGGAAAC GCAGGGCCAC (2) GGCCACGGGA (2) GGCCCAAGGC (2) GGGATCAGTC (2) GGGCCCAGGC (2) GGGCTTCTCT GGTGGCAGGA GTGGGTCTCA GTTAGGGTAT GTTTGGAGCT (4) TGGGGAAGAA 110.2 0.1102 3T3 fibroblasts CCCTGAGGGT (3) CCTGAGGGTA CCTGGGGAAG CTGTACCACA (2) GAGGAAGTGG (2) GCAGGGCCAC (2) GGCCCAAGGC (2) GTTTGGAGCT (4) TGGGGAAGAA 84 0.084 E15 cortex AGGGAAGTGC (2) CCCTGAGGGG CCTGAGGGTA GAGGAAGTGG (2) GCAGAAAAAC (2) GCAGGGCCAC (2) GCTGTGGGGT GGGATCAGTC (2) GGGCCCAGGC (2) GGTGGCAGGA GTTTGGAGCT (4) TCACCGACAG TGGGGAAGAA TGGTTGCTCT (2) 108.3 0.1083 P1 cortex ACCTTTGGAA (3) AGGGAGAAAA CCCTGAGGGT (3) CTGTCAGTGG (2) GAAGACTTGA GAATGGAAAC GAGAAGTGCT GGCCCAAGGC (2) GGGCCCAGGC (2) GGGCTTCTCT TGGGGAAGAA TGGTTGCTCT (2) 99.7 0.0997 Hypothalamus AAGACCTGTC (2) AATTAAAACA ACACCTTTTA (2) CCCTGAGGGG CCCTGAGGGT (3) CCTGAGGGTA CCTGTACAAC (2) CTGGAGGGAG CTGGTGTGGC (2) GAAGACTTGA GAAGGACAAA GAATGGAAAC GCAGGGCCAC (2) GGCCACGGGA (2) GGCCCAAGGC (2) GGGCCCAGGC (2) GGTGGCAGGA GTTAGGGTAT TCACCGACAG TGGGGAAGAA 84.9 0.0849 E12.5 retina CCAGGGAAGA (2) CCCTGAGGGG CCCTGAGGGT (3) CCTGGGGAAG CCTGTACAAC (2) CTGTACCACA (2) GAAGGACAAA GAATGGAAAC GCAGGGCCAC (2) GGCCCAAGGC (2) GGGATCAGTC (2) GGGCCCAGGC (2) GGGCTTCTCT GTTTGGAGCT (4) TGGGGAAGAA TGGTTGCTCT (2) 58.7 0.0587 E14.5 retina AATTAAAACA AGGGAAGTGC (2) CCCTGGAGGG CCTGAGGGTA CCTGGGGAAG CCTGTACAAA CCTGTACAAC (2) CTGTCAGTGG (2) GCAGAAAAAC (2) GCAGGGCCAC (2) GGGCCCAGGC (2) GGGCTTCTCT TCACCGACAG TGCAGGCCAG (2) TGGCTTGCTC (3) TGGGGAAGAA TGGTTGCTCT (2) 50.7 0.0507 E16.5 retina ACTTTCCACA AGGGAAGTGC (2) CCAGGGAAGA (2) CCCTGAGGGG CCCTGAGGGT (3) CCCTGGAGGG CCTGAGGGTA CCTGGGGAAG CCTGTACAAC (2) CTGGAGGGAG CTGTACCACA (2) CTGTCAGTGG (2) GAAGGACAAA GCAGGGCCAC (2) GGCCCAAGGC (2) GGGCCCAGGC (2) GGTGGCAGGA GTTAGGGTAT GTTTGGAGCT (4) TCACCGACAG TGGCTTGCTC (3) TGGGGAAGAA TGGTTGCTCT (2) 72 0.072 E18.5 retina CCTGGGGAAG CCTGTACAAC (2) CTGTCAGTGG (2) GAAGGACAAA GGCCCAAGGC (2) GGCTTCTCTG (2) GGGATCAGTC (2) GGGCCCAGGC (2) GTGGCTCGAA GTTTGGAGCT (4) TCACCGACAG TGGGGAAGAA 39.8 0.0398 P0.5 retina AACAACACAG (2) ACTTTCCACA CCCTGAGGGT (3) CCTGGGGAAG CCTGTACAAA CTGTCAGTGG (2) GAAGACTTGA GAAGGACAAA GCGGGGACTT GGCCCAAGGC (2) GGGCCCAGGC (2) GGGCTTCTCT TGGGGAAGAA TGGTTGCTCT (2) 70.9 0.0709 P2.5 retina AGGGAAGTGC (2) CCCTGAGGGG CCCTGAGGGT (3) CCTGGGGAAG CCTGTACAAC (2) CTGGAGGGAG CTGTCAGTGG (2) GAAGACTTGA GAGAAGTGCT GCAGGGCCAC (2) GGCCCAAGGC (2) GGGCCCAGGC (2) GTGGCTCGAA GTTAGGGTAT TCACCGACAG TGCAGGCCAG (2) TGGGGAAGAA 84.7 0.0847 P4.5 retina CCCTGAGGGT (3) CCTGTACAAC (2) CTGTACCACA (2) CTGTCAGTGG (2) GCAGGGCCAC (2) GGCCCAAGGC (2) GGGATCAGTC (2) GGGCCCAGGC (2) GGTGGCAGGA GTTAGGGTAT TGGCTTGCTC (3) TGGGGAAGAA TGGTTGCTCT (2) 59.7 0.0597 P6.5 retina AAGAAAACAG (3) AATTAAAACA ACCTTTGGAA (3) CCCTGAGGGG CCCTGAGGGT (3) CCTGTACAAC (2) CTGTCAGTGG (2) GAAGACTTGA GAATGGAAAC GAGGAAGTGG (2) GCAGGGCCAC (2) GGCCCAAGGC (2) GGGCCCAGGC (2) GGTGGCAGGA GTTAGGGTAT TGGGGAAGAA 70.1 0.0701 P10.5 crx- retina AGGGAGAAAA CCCTGAGGGG CCCTGAGGGT (3) CCTGAGGGTA CTGGTGTGGC (2) CTGTACCACA (2) CTGTCAGTGG (2) GGCCCAAGGC (2) GGGCCCAGGC (2) GGGCTTCTCT GGGTGGCCCA GGTGGCAGGA GTTAGGGTAT GTTTGGAGCT (4) TGCAGGCCAG (2) TGGCTTGCTC (3) TGGTTGCTCT (2) 119.3 0.1193 P10.5 crx+ retina ACACCTTTTA (2) CCCTGAGGGG CCCTGAGGGT (3) CCTGGGGAAG CCTGTACAAA CCTGTACAAC (2) CTGTACCACA (2) CTGTCAGTGG (2) GAAGGACAAA GAATGGAAAC GCAGAAAAAC (2) GCAGGGCCAC (2) GCGGGGACTT GGCCACGGGA (2) GGCCCAAGGC (2) GGGCCCAGGC (2) GGGTGGCCCA GGTGGCAGGA GTGGCTCGAA GTTAGGGTAT TGGGGAAGAA TGGTTGCTCT (2) 132.1 0.1321 Adult retinal AAGAAAACAG (3) AGGGAAGTGC (2) CCCTGAGGGG CCCTGAGGGT (3) CCTGAGGGTA CCTGTACAAC (2) CTGTACCACA (2) CTGTCAGTGG (2) GAAGACTTGA GAGGAAGTGG (2) GGCCACGGGA (2) GGCCCAAGGC (2) GGGCCCAGGC (2) GTTAGGGTAT TCACCGACAG TGGGGAAGAA 78.2 0.0782 ONL AAGACCTGTC (2) CCCTGAGGGG CCCTGAGGGT (3) CTGTCAGTGG (2) GAAGACTTGA GAGGAAGTGG (2) GCAGAAAAAC (2) GCAGGGCCAC (2) GCTGTGGGGT GGCCCAAGGC (2) GGGCCCAGGC (2) GGGCTTCTCT GGGTGGCCCA GGTGGCAGGA GTGGGTCTCA TGGGGAAGAA 49.5 0.0495