Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.3746	D12Mgi41	DNA Segment, Chr 12, Mouse Genome Informatics 41	12		404597
Mm.3746	Naca	nascent polypeptide-associated complex alpha polypeptide	10		17938
Gene Ontology	cytoplasm | nucleus | TATA-binding protein binding | transcription coactivator activity
Human Homolog	NACA[nascent-polypeptide-associated complex alpha polypeptide]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 69 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TACTTTTGGC TCGCAAGCAA (2) TCGCAGCAAA TGGGAAAGGA TTACAGGGGT 42.3 0.0423 Cb medulloblastoma ACCAGTTCTA (3) GCAATTAACA (3) TACTTTTGGC TCGCAAGCAA (2) TCGCAGCAAA TGCAAACAGA (2) 36.9 0.0369 P8 GC+1d culture TACTTTTGGC TCGCAAGCAA (2) TCGCAGCAAA 58.2 0.0582 P8 GC+SHH+1d culture ACCAGTTCTA (3) TACTTTTGGC TCGCAAGCAA (2) TCGCAGCAAA TGCAAACAGA (2) 54 0.054 3T3 fibroblasts ACCAGTTCTA (3) TACTTTTGGC TCGCAAGCAA (2) 70.1 0.0701 E15 cortex GCAATTAACA (3) TCGCAAGCAA (2) 69.2 0.0692 P1 cortex TCGCAAGCAA (2) 13.6 0.0136 Hypothalamus ACCAGTTCTA (3) TCGCAAGCAA (2) 25.3 0.0253 E12.5 retina ACCAGTTCTA (3) GCAATTAACA (3) TACTTTTGGC TCGCAAGCAA (2) TTACAGGGGT 69.6 0.0696 E14.5 retina ACCAGTTCTA (3) TCGCAAGCAA (2) TGCAAACAGA (2) TGGGAAAGGA TTACAGGGGT 38.2 0.0382 E16.5 retina ACCAGTTCTA (3) TACTTTTGGC TCGCAAGCAA (2) TCGCAGCAAA TGGGAAAGGA 68.7 0.0687 E18.5 retina TCGCAAGCAA (2) 25.5 0.0255 P0.5 retina ACCAGTTCTA (3) TCGCAAGCAA (2) 74.6 0.0746 P2.5 retina ATGAAAATGG TCGCAAGCAA (2) TCGCAGCAAA TTACAGGGGT 40.6 0.0406 P4.5 retina ACCAGTTCTA (3) TCGCAAGCAA (2) TCGCAGCAAA TTACAGGGGT 21.9 0.0219 P6.5 retina TCGCAAGCAA (2) TGCAAACAGA (2) TTACAGGGGT 31.7 0.0317 P10.5 crx- retina ATGAAAATGG TCGCAAGCAA (2) TGCAAACAGA (2) TTACAGGGGT 78.1 0.0781 P10.5 crx+ retina ACCAGTTCTA (3) TCGCAAGCAA (2) TCGCAGCAAA 34.5 0.0345 Adult retinal ATGAAAATGG TCGCAAGCAA (2) TTACAGGGGT 22.3 0.0223 ONL ACCAGTTCTA (3) TCGCAAGCAA (2) TTACAGGGGT 15.3 0.0153