Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.3757	Prpf8	pre-mRNA processing factor 8	11	11 45.0 cM	192159
Gene Ontology	nuclear mRNA splicing, via spliceosome | protein binding | snRNP U5
Human Homolog	PRPF8[PRP8 pre-mRNA processing factor 8 homolog (yeast)] | PRPF8[PRP8 pre-mRNA processing factor 8 homolog (yeast)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 81 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAGCCAACCC AGGTCCACAG (2) ATGGCAAGCT GGATCGAGGC GGGCTCACCA 13 0.013 Cb medulloblastoma AGGTCCACAG (2) ATGGCAAGCT GGGCTCACCA 11.5 0.0115 P8 GC+1d culture AAGCCAACCC AGGTCCACAG (2) AGTCACAGCC ATGGCAAGCT GGGCTCACCA GTGAAAACCA 13.5 0.0135 P8 GC+SHH+1d culture AAGCCAACCC AAGGTCACAG (2) AGGTCCACAG (2) ATGGCAAGCT GTGAAAACCA TGTGGCTTTT (2) 20.1 0.0201 3T3 fibroblasts AAGCCAACCC AAGGTCACAG (2) AGGTCCACAG (2) ATGGCAAGCT GGGCTCACCA 28 0.028 E15 cortex AGGTCCACAG (2) 4.9 0.0049 P1 cortex AGGTCCACAG (2) GGGCTCACCA TGTGGCTTTT (2) 22.6 0.0226 Hypothalamus AAGGTCACAG (2) AGGTCCACAG (2) AGTCACAGCC GTGAAAACCA TGTGGCTTTT (2) 10.8 0.0108 E12.5 retina AAGGTCACAG (2) AGGTCCACAG (2) GGGCTCACCA 13.1 0.0131 E14.5 retina AGGTCCACAG (2) ATGGCAAGCT GGGCTCACCA GTGAAAACCA 16.3 0.0163 E16.5 retina AAATACGAGC AAGGTCACAG (2) AGGTCCACAG (2) AGTCACAGCC GTGAAAACCA 12.6 0.0126 E18.5 retina AGGTCCACAG (2) GGGCTCACCA TGCACCACTG (3) 10.9 0.0109 P0.5 retina AGGTCCACAG (2) ATGGCAAGCT GGGCTCACCA GTGAAAACCA 29.5 0.0295 P2.5 retina AAGGTCACAG (2) GGGCTCACCA 3.6 0.0036 P4.5 retina AGGTCCACAG (2) ATGGCAAGCT GGATCGAGGC GGGCTCACCA GTGAAAACCA 15.9 0.0159 P6.5 retina AAGCCAACCC AGGTCCACAG (2) ATGGCAAGCT GGGCTCACCA 11.7 0.0117 P10.5 crx- retina AAATACGAGC AGGTCCACAG (2) ATGGCAAGCT GGGCTCACCA TGTGGCTTTT (2) 18.7 0.0187 P10.5 crx+ retina AAGGTCACAG (2) AGGTCCACAG (2) TGCACCACTG (3) 11.5 0.0115 Adult retinal AAGGTCACAG (2) AGGTCCACAG (2) GCCAAATTAA GGGCTCACCA GTGAAAACCA 15 0.015 ONL AGGTCCACAG (2) GCCAAATTAA GGGCTCACCA GTGAAAACCA 21 0.021