| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 GC+1d culture | AGAGGCTTCT (3)
| 1.1 | 0.0011 |
| P8 GC+SHH+1d culture | AGAGGCTTCT (3) GAAAGGGAGG (3)
| 3.5 | 0.0035 |
| 3T3 fibroblasts | GAAAGGGAGG (3)
| 10.5 | 0.0105 |
| E15 cortex | GAAAGGGAGG (3)
| 4.9 | 0.0049 |
| Hypothalamus | AGAGGCTTCT (3) GAAAGGGAGG (3) TATGTATGTA (2)
| 10.8 | 0.0108 |
| E12.5 retina | GAAAGGGAGG (3) TATGTATGTA (2)
| 18.8 | 0.0188 |
| E14.5 retina | AGAGGCTTCT (3) GAAAGGGAGG (3) TATGTATGTA (2)
| 14.5 | 0.0145 |
| E16.5 retina | AGAGGCTTCT (3) GAAAGGGAGG (3) TATGTATGTA (2)
| 16.3 | 0.0163 |
| E18.5 retina | TATGTATGTA (2)
| 1.8 | 0.0018 |
| P0.5 retina | AGAGGCTTCT (3) GAAAGGGAGG (3) GATGGGAGCA
| 17.7 | 0.0177 |
| P2.5 retina | AGAGGCTTCT (3) GAAAGGGAGG (3)
| 21.2 | 0.0212 |
| P4.5 retina | GAAAGGGAGG (3) TATGTATGTA (2)
| 11.9 | 0.0119 |
| P6.5 retina | GAAAGGGAGG (3)
| 10 | 0.01 |
| P10.5 crx- retina | AGAGGCTTCT (3) GAAAGGGAGG (3)
| 7.4 | 0.0074 |
| P10.5 crx+ retina | GAAAGGGAGG (3) GATGGGAGCA TATGTATGTA (2)
| 9.6 | 0.0096 |
| Adult retinal | AGAGGCTTCT (3) GAAAGGGAGG (3)
| 7.5 | 0.0075 |
| ONL | GAAAGGGAGG (3) TATGTATGTA (2)
| 3.8 | 0.0038 |