| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AAAGAAAAAA (2) AAAGAAAGTT (3) CTGAACACAT
| 19.5 | 0.0195 |
| Cb medulloblastoma | AAAGAAAAAA (2) AAAGAAAGTT (3) CTGAACACAT
| 18.5 | 0.0185 |
| P8 GC+1d culture | AAAGAAAAAA (2) AAAGAAAGTT (3) CTGAACACAT GCAGGGGTTC
| 22.9 | 0.0229 |
| P8 GC+SHH+1d culture | AAAGAAAAAA (2) AAAGAAAGTT (3) CTGAACACAT
| 25.8 | 0.0258 |
| 3T3 fibroblasts | CTGAACACAT
| 7 | 0.007 |
| E15 cortex | AAAGAAAAAA (2) AAAGAAAGTT (3)
| 9.8 | 0.0098 |
| P1 cortex | AAAGAAAAAA (2) AAAGAAAGTT (3) CTGAACACAT
| 27.2 | 0.0272 |
| Hypothalamus | AAAGAAAAAA (2) AAAGAAAGTT (3) GCAGGGGTTC
| 12.7 | 0.0127 |
| E12.5 retina | CTGAACACAT
| 9.4 | 0.0094 |
| E14.5 retina | AAAGAAAGTT (3) CTGAACACAT
| 14.6 | 0.0146 |
| E16.5 retina | AAAGAAAAAA (2) AAAGAAAGTT (3) CTGAACACAT
| 14.4 | 0.0144 |
| E18.5 retina | AAAGAAAAAA (2) AAAGAAAGTT (3) CTGAACACAT
| 21.8 | 0.0218 |
| P0.5 retina | AAAGAAAAAA (2) CTGAACACAT
| 13.8 | 0.0138 |
| P2.5 retina | AAAGAAAAAA (2) AAAGAAAGTT (3) CTGAACACAT
| 15.9 | 0.0159 |
| P4.5 retina | AAAGAAAAAA (2) AAAGAAAGTT (3) CTGAACACAT
| 19.8 | 0.0198 |
| P6.5 retina | AAAGAAAAAA (2) AAAGAAAGTT (3) CTGAACACAT GCAGGGGTTC
| 20 | 0.02 |
| P10.5 crx- retina | AAAGAAAGTT (3) CTGAACACAT GCAGGGGTTC
| 11.2 | 0.0112 |
| P10.5 crx+ retina | AAAGAAAGTT (3) CTGAACACAT
| 9.6 | 0.0096 |
| Adult retinal | CTGAACACAT GCAGGGGTTC
| 5.6 | 0.0056 |
| ONL | AAAGAAAAAA (2) AAAGAAAGTT (3)
| 7.6 | 0.0076 |