Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.38166	2610203C20Rik	RIKEN cDNA 2610203C20 gene	9		70455
Mm.38166	D3Mgi9	DNA Segment, Chr 3, Mouse Genome Informatics 9	3		99733
Mm.38166	D230004N17Rik	RIKEN cDNA D230004N17 gene	9		320833
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 77 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GCTTTGACTG (3) TATGTGTGCA (3) TTTACAGCTG (3) TTTTTTTTCC (3) 16.2 0.0162 Cb medulloblastoma GCTTTGACTG (3) GTGGCTGCCA TATGTGTGCA (3) TTTACAGCTG (3) TTTTTTTTCC (3) 13.8 0.0138 P8 GC+1d culture GTGGCTGCCA TGCCAAGCTC (3) TTTACAGCTG (3) TTTTTTTTCC (3) 6.8 0.0068 P8 GC+SHH+1d culture TGCCAAGCTC (3) TTTACAGCTG (3) TTTTTTTTCC (3) 11.8 0.0118 3T3 fibroblasts GCTTTGACTG (3) TTTACAGCTG (3) TTTTTTTTCC (3) 14 0.014 E15 cortex GCTTTGACTG (3) GTGGCTGCCA TGCCAAGCTC (3) TTTACAGCTG (3) 24.6 0.0246 P1 cortex GCTTTGACTG (3) TATGTGTGCA (3) 18.1 0.0181 Hypothalamus GCTTTGACTG (3) TATGTGTGCA (3) TTTACAGCTG (3) TTTTTTTTCC (3) 25.3 0.0253 E12.5 retina TATGTGTGCA (3) TGCCAAGCTC (3) TTTTTTTTCC (3) 7.6 0.0076 E14.5 retina GCTTTGACTG (3) TATGTGTGCA (3) TGCCAAGCTC (3) TTTACAGCTG (3) TTTTTTTTCC (3) 32.7 0.0327 E16.5 retina GTGGCTGCCA TATGTGTGCA (3) TGCCAAGCTC (3) TTTACAGCTG (3) TTTTTTTTCC (3) 47 0.047 E18.5 retina TATGTGTGCA (3) TTTACAGCTG (3) TTTTTTTTCC (3) 25.4 0.0254 P0.5 retina TATGTGTGCA (3) TGCCAAGCTC (3) TTTACAGCTG (3) TTTTTTTTCC (3) 13.7 0.0137 P2.5 retina GTGGCTGCCA TATGTGTGCA (3) TGCCAAGCTC (3) TTTACAGCTG (3) TTTTTTTTCC (3) 15.9 0.0159 P4.5 retina TATGTGTGCA (3) TGCCAAGCTC (3) TTTACAGCTG (3) TTTTTTTTCC (3) 19.8 0.0198 P6.5 retina GCTTTGACTG (3) TGCCAAGCTC (3) TTTACAGCTG (3) TTTTTTTTCC (3) 16.7 0.0167 P10.5 crx- retina GCTTTGACTG (3) GTGGCTGCCA TATGTGTGCA (3) TTTACAGCTG (3) 7.6 0.0076 P10.5 crx+ retina TATGTGTGCA (3) TGCCAAGCTC (3) TTTACAGCTG (3) TTTTTTTTCC (3) 11.4 0.0114 Adult retinal GTGGCTGCCA TATGTGTGCA (3) TTTACAGCTG (3) TTTTTTTTCC (3) 9.4 0.0094 ONL TGCCAAGCTC (3) TTTACAGCTG (3) TTTTTTTTCC (3) 15.3 0.0153