| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | ATTCCGAATT (2) CAAAATAAAA (3) GCGGAATTGC (3) GGTTCAGGAA (2) TCTGTTTTCC
| 13 | 0.013 |
| Cb medulloblastoma | CAAAATAAAA (3) TCTGTTTTCC
| 6.9 | 0.0069 |
| P8 GC+1d culture | CAAAATAAAA (3) GGTTCAGGAA (2) TCTGTTTTCC TTTCTTTTCT (2)
| 11.4 | 0.0114 |
| P8 GC+SHH+1d culture | CAAAATAAAA (3) GGTTTAGGAA TCTGTTTTCC
| 9.4 | 0.0094 |
| 3T3 fibroblasts | CAAAATAAAA (3) TCTGTTTTCC
| 7 | 0.007 |
| E15 cortex | GGTTCAGGAA (2) TCTGTTTTCC
| 14.8 | 0.0148 |
| P1 cortex | TCTGTTTTCC TTTCTTTTCT (2)
| 9 | 0.009 |
| Hypothalamus | GCGGAATTGC (3) GGTTCAGGAA (2) TCTGTTTTCC
| 7.2 | 0.0072 |
| E14.5 retina | TCTGTTTTCC
| 3.6 | 0.0036 |
| E16.5 retina | TCTGTTTTCC
| 1.8 | 0.0018 |
| E18.5 retina | CAAAATAAAA (3) GGTTTAGGAA TCTGTTTTCC
| 5.4 | 0.0054 |
| P0.5 retina | GCGGAATTGC (3) GGTTCAGGAA (2)
| 5.9 | 0.0059 |
| P2.5 retina | CAAAATAAAA (3) TCTGTTTTCC
| 3.6 | 0.0036 |
| P4.5 retina | ATTCCGAATT (2) CAAAATAAAA (3) GCGGAATTGC (3) GGTTCAGGAA (2) GGTTTAGGAA TCTGTTTTCC
| 17.9 | 0.0179 |
| P6.5 retina | ATTCCGAATT (2) GGTTCAGGAA (2) TCTGTTTTCC TTTCTTTTCT (2)
| 8.4 | 0.0084 |
| P10.5 crx- retina | CAAAATAAAA (3) GGTTCAGGAA (2) TCTGTTTTCC
| 7.5 | 0.0075 |
| P10.5 crx+ retina | CAAAATAAAA (3) TCTGTTTTCC
| 9.6 | 0.0096 |
| Adult retinal | CAAAATAAAA (3) GCGGAATTGC (3) TCTGTTTTCC
| 9.4 | 0.0094 |
| ONL | ATTCCGAATT (2) CAAAATAAAA (3) GCGGAATTGC (3)
| 9.5 | 0.0095 |