Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.38445	Tmod3	tropomodulin 3	9	9 38.0 cM	50875
Gene Ontology	actin binding | actin filament organization | cytoskeleton | F-actin capping protein complex | tropomyosin binding
Human Homolog	TMOD3[tropomodulin 3 (ubiquitous)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 136 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCAGTGCCTG (3) CCTTGAAAAT GGAAACATTT GTAGCTCACA (3) TAGACGTACT TGCTGGGAAG (5) TTGAAATACT 55.4 0.0554 Cb medulloblastoma GGGAAGGGCT GTAGCTCACA (3) TAGACGTACT TGCTGGGAAG (5) 43.9 0.0439 P8 GC+1d culture AATTTAGGCA ACATAAAAAA (2) CCAGTGCCTG (3) CCTTGAAAAT GGGAAGGGCT GTAGCTCACA (3) TAGACGTACT TGCTGGGAAG (5) 63.8 0.0638 P8 GC+SHH+1d culture AATTTAGGCA CCAGTGCCTG (3) CCTTGAAAAT GGGAAGGGCT GTAGCTCACA (3) TAAATAGAAC TAGACGTACT TGCTGGGAAG (5) TTGAAATACT 77.3 0.0773 3T3 fibroblasts CCAGTGCCTG (3) GTAGCTCACA (3) TAGACGTACT 38.5 0.0385 E15 cortex CCAGTGCCTG (3) GGGAAGGGCT GTAGCTCACA (3) TGCTGGGAAG (5) 79.1 0.0791 P1 cortex CCAGTGCCTG (3) GGGAAGGGCT GTAGCTCACA (3) TGCTGGGAAG (5) 31.7 0.0317 Hypothalamus ACGTAAAAAA (2) CCAGTGCCTG (3) GGGAAGGGCT GTAGCTCACA (3) TAGACGTACT TGCTGGGAAG (5) TTGAAATACT 83.2 0.0832 E12.5 retina AATTTAGGCA CCAGTGCCTG (3) GGAAACATTT GTAGCTCACA (3) TAGACGTACT TTGAAATACT 65.8 0.0658 E14.5 retina CCAGTGCCTG (3) GGGAAGGGCT GTAGCTCACA (3) TAGACGTACT TGTTTTCTTT (3) TTGAAATACT 63.7 0.0637 E16.5 retina AAATTGTATA (2) CCAGTGCCTG (3) GTAGCTCACA (3) TAGACGTACT TGCTGGGAAG (5) TTGAAATACT 63.4 0.0634 E18.5 retina AAATTGTATA (2) ACATAAAAAA (2) CCAGTGCCTG (3) GGGAAGGGCT GTAGCTCACA (3) TAGACGTACT TGCTGGGAAG (5) TGTTTTCTTT (3) TTGAAATACT 49 0.049 P0.5 retina AAATTGTATA (2) CCAGTGCCTG (3) GGGAAGGGCT GTAGCTCACA (3) TAGACGTACT TGCTGGGAAG (5) TGTTTTCTTT (3) 57 0.057 P2.5 retina ACGTAAAAAA (2) CCAGTGCCTG (3) GGAAACATTT GGGAAGGGCT GTAGCTCACA (3) TAGACGTACT TGCTGGGAAG (5) TTGAAATACT 59.9 0.0599 P4.5 retina CCAGTGCCTG (3) CCTTGAAAAT GGAAACATTT GGGAAGGGCT GTAGCTCACA (3) TAGACGTACT TGCTGGGAAG (5) TTGAAATACT 75.4 0.0754 P6.5 retina AATTTAGGCA CCAGTGCCTG (3) CCTTGAAAAT GGGAAGGGCT GTAGCTCACA (3) TAGACGTACT TGCTGGGAAG (5) TTGAAATACT 68.4 0.0684 P10.5 crx- retina CCAGTGCCTG (3) GGAAACATTT GGGAAGGGCT GTAGCTCACA (3) TAGACGTACT TGCTGGGAAG (5) TTGAAATACT 50.1 0.0501 P10.5 crx+ retina AAATTGTATA (2) CCAGTGCCTG (3) GGAAACATTT GGGAAGGGCT GTAGCTCACA (3) TAAATAGAAC TAGACGTACT TGCTGGGAAG (5) TTGAAATACT 82.5 0.0825 Adult retinal CCAGTGCCTG (3) CCTTGAAAAT GGAAACATTT GGGAAGGGCT GTAGCTCACA (3) TAGACGTACT TGCTGGGAAG (5) TTGAAATACT 70.6 0.0706 ONL CCAGTGCCTG (3) GGAAACATTT GTAGCTCACA (3) TAAATAGAAC TAGACGTACT TGCTGGGAAG (5) TGTTTTCTTT (3) TTGAAATACT 65.1 0.0651