Mouse Retina SAGE Library    [Home]    [Libraries]    [Images]

Gene:              Accession:    
e.g., Rho or Rhodopsin e.g., BG297543 batch search
Tag:        Cytoband (Mm):    
e.g., CCCAGTTCAC e.g., 6 E3
Unigene:        Cytoband (Hs):    
e.g., Mm.2965 batch search e.g., 3q21-q24


 UniGene  Symbol  Name  Chr  Cytoband  LocusLink 
 Mm.3879 Hif1ahypoxia inducible factor 1, alpha subunit 12  12 C3 (12 31.0 cM)  15251 
 Gene Ontology angiogenesis | cell differentiation | DNA binding | flagellum (sensu Eukarya) | nucleus | protein binding | regulation of transcription, DNA-dependent | response to hypoxia | response to hypoxia | signal transducer activity | signal transduction | transcription factor activity
 Human Homolog HIF1A[hypoxia-inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)]
 Clusters 
   Neighbors    

Total 6 In Situ Hybridization Images

Images -- Click to Enlarge



SAGE Tags

Total 145 tags found with positive counts.

  all tags    reliable tags    sum by library with all tags    sum by library with reliable tags  
 Library  Tag (Other Genes)  Normalized Count  % in library 
P8 Cb GCAAATAAAAAA (2)
AATTTTTGTT (2)
AGGAAATGAG (2)
CAGACTGTGG (3)
TTTTGTTTTT (2)
19.60.0196
Cb medulloblastomaAAATAAAAAA (2)
ACATTATTTT (3)
AGGAAATGAG (2)
ATTTTTGTAT (5)
TTAAATAATG
TTTTGTTTTT (2)
20.70.0207
P8 GC+1d cultureAAGCTGTTGA (2)
AATTTTTGTT (2)
AGGAAATGAG (2)
ATTTTTGTAT (5)
CACCTGTGTG (2)
TTAAATAATG
14.80.0148
P8 GC+SHH+1d cultureAAATAAAAAA (2)
AAGCTGTTGA (2)
AATTTTTGTT (2)
AGGAAATGAG (2)
ATTTTTGTAT (5)
CAATATATTC
GCACATTAAT
TTAAATAATG
TTTTGTTTTT (2)
270.027
3T3 fibroblastsCAGACTGCTG
GTGGTGTGGT (2)
70.007
E15 cortexAATTTTTGTT (2)
AGGAAATGAG (2)
ATTTTTAGTT
29.60.0296
P1 cortexAAATAAAAAA (2)
AATTTTTGTT (2)
AGGAAATGAG (2)
ATTTTTGTAT (5)
CTTTGTTAGT
TTTTGTTTTT (2)
36.20.0362
HypothalamusAAATAAAAAA (2)
AATTTTTGTT (2)
ACATTTAGGG
CAGACTGTGG (3)
GGGATGAAAA
GTTTTGGTTT (2)
TTTTGTTTTT (2)
19.80.0198
E12.5 retinaAAATAAAAAA (2)
AATTTTTGTT (2)
AGGAAATGAG (2)
ATTTTTGTAT (5)
CACCTGTGTG (2)
CAGACTGCTG
CTTTGTTAGT
22.60.0226
E14.5 retinaAAATAAAAAA (2)
AATTTTTGTT (2)
AGGAAATGAG (2)
ATTTTTAGTT
ATTTTTGTAT (5)
CTTTGTTAGT
GCACATTAAT
GTTTTGGTTT (2)
TTTTGTTTTT (2)
36.30.0363
E16.5 retinaAAATAAAAAA (2)
AATTTTTGTT (2)
ACATTATTTT (3)
ACATTTAGGG
AGGAAATGAG (2)
ATTTTTGTAT (5)
CTTTGTTAGT
GCACATTAAT
TTTTGTTTTT (2)
21.60.0216
E18.5 retinaAAATAAAAAA (2)
AGGAAATGAG (2)
ATTTTTGTAT (5)
CTTTGTTAGT
GCACATTAAT
TTAAATAATG
25.40.0254
P0.5 retinaAAGCTGGTGG
AATTTTTGTT (2)
ACATTTAGGG
AGGAAATGAG (2)
CAATATATTC
CAGACTGCTG
CTTTGTTAGT
GCACATTAAT
25.70.0257
P2.5 retinaAAATAAAAAA (2)
AGGAAATGAG (2)
CTTTGTTAGT
GGGATGAAAA
TTAAATAATG
17.70.0177
P4.5 retinaAAATAAAAAA (2)
AATTTTTGTT (2)
AGGAAATGAG (2)
ATTTTTGTAT (5)
CTTTGTTAGT
TTAAATAATG
TTTTGTTTTT (2)
25.80.0258
P6.5 retinaAAATAAAAAA (2)
AATTTTTGTT (2)
AGGAAATGAG (2)
ATTTTTGTAT (5)
CAGACTGCTG
CTTTGTTAGT
GCACATTAAT
GTGGTGTGGT (2)
GTTTTGGTTT (2)
39.90.0399
P10.5 crx- retinaAAATAAAAAA (2)
AAGCTGTTGA (2)
AATTTTTGTT (2)
AGGAAATGAG (2)
ATTTTTGTAT (5)
CAGACTGCTG
CAGACTGTGG (3)
CTTTGTTAGT
GCACATTAAT
TTAAATAATG
44.60.0446
P10.5 crx+ retinaAAATAAAAAA (2)
AATTTTTGTT (2)
ACATTATTTT (3)
AGGAAATGAG (2)
ATTTTTGTAT (5)
CAATATATTC
CAGACTGCTG
CTTTGTTAGT
GGGATGAAAA
GTTTTGGTTT (2)
TTAAATAATG
TTTTGTTTTT (2)
440.044
Adult retinalAAATAAAAAA (2)
AAGCTGGTGG
AATTTTTGTT (2)
ACATTATTTT (3)
AGGAAATGAG (2)
ATTTTTGTAT (5)
CACCTGTGTG (2)
CAGACTGCTG
CTTTGTTAGT
GCACATTAAT
26.30.0263
ONLAAATAAAAAA (2)
AAGCTGGTGG
ACATTATTTT (3)
AGGAAATGAG (2)
ATTTTTAGTT
ATTTTTGTAT (5)
CAGACTGCTG
CTTTGTTAGT
GTGGTGTGGT (2)
420.042