Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.38851	5830445O15Rik	RIKEN cDNA 5830445O15 gene	2		76051
Gene Ontology	carbohydrate metabolism | hydrolase activity | hydrolase activity, acting on glycosyl bonds | hydrolase activity, hydrolyzing O-glycosyl compounds
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 80 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AGCCAAAATA (2) GCCCAGACTG GCTAAAAAAA (2) TTTGTCAGAT (2) TTTTTTTTTT (2) 17.9 0.0179 Cb medulloblastoma AGCCAAAATA (2) GCCCAGACTG GCTAAAAAAA (2) GGTGAAACCA TAGAGGTCAG (2) TTTGTCAGAT (2) TTTTTTTTTT (2) 25.3 0.0253 P8 GC+1d culture AGCCAAAATA (2) GCCCAGACTG GCTAAAAAAA (2) TTTTTTTTTT (2) 24 0.024 P8 GC+SHH+1d culture AGCCAAAATA (2) GCCCAGACTG GCTAAAAAAA (2) TTTGTCAGAT (2) TTTTTTTTTT (2) 18.7 0.0187 3T3 fibroblasts GCCCAGACTG GCTAAAAAAA (2) 17.5 0.0175 E15 cortex GCTAAAAAAA (2) TTTGTCAGAT (2) TTTTTTTTTT (2) 14.7 0.0147 P1 cortex GCCCAGACTG TTTTTTTTTT (2) 9 0.009 Hypothalamus AGCCAAAATA (2) GCTAAAAAAA (2) TAGAGGTCAG (2) TCCTATCATT (3) TTTTTTTTTT (2) 23.5 0.0235 E12.5 retina GCTAGTTAAA TTTGTCAGAT (2) TTTTTTTTTT (2) 15 0.015 E14.5 retina AGCCAAAATA (2) GCCCAGACTG GCTAGTTCCA TCCTATCATT (3) TTTGTCAGAT (2) TTTTTTTTTT (2) 40 0.04 E16.5 retina GCCAGACTGG GCTAAAAAAA (2) GGTGAAACCA TTTGTCAGAT (2) TTTTTTTTTT (2) 25.3 0.0253 E18.5 retina AGCCAAAATA (2) TTTGTCAGAT (2) TTTTTTTTTT (2) 18.1 0.0181 P0.5 retina GCCCAGACTG GCTAGTTCCA TTTGTCAGAT (2) TTTTTTTTTT (2) 25.5 0.0255 P2.5 retina GCCAGACTGG GCCCAGACTG GCTAGTTCCA GGTGAAACCA TTTGTCAGAT (2) TTTTTTTTTT (2) 24.6 0.0246 P4.5 retina GCCCAGACTG GCTAAAAAAA (2) TTTGTCAGAT (2) TTTTTTTTTT (2) 15.9 0.0159 P6.5 retina AGCCAAAATA (2) GCCCAGACTG TTTTTTTTTT (2) 15 0.015 P10.5 crx- retina GCCCAGACTG TTTGTCAGAT (2) 9.3 0.0093 P10.5 crx+ retina GCCCAGACTG TTTTTTTTTT (2) 15.3 0.0153 Adult retinal GCCAGACTGG GCCCAGACTG TAGAGGTCAG (2) TTTGTCAGAT (2) TTTTTTTTTT (2) 16.8 0.0168 ONL AGCCAAAATA (2) GCCCAGACTG GCTAGTTCCA TTTTTTTTTT (2) 13.3 0.0133