| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | ACTGACTCCA (2) AGCCTGAACA AGTAAGAACA (2) CTGTGCCAAT (2) GGGATTCATT
| 9.7 | 0.0097 |
| Cb medulloblastoma | ACTGACTCCA (2) AGCCTGAACA CCAAGCTTGA (2)
| 16.1 | 0.0161 |
| P8 GC+1d culture | AGCCTGAACA CCAAGCTTGA (2) CTGTGCCAAT (2)
| 6.8 | 0.0068 |
| P8 GC+SHH+1d culture | AGCCTGAACA AGTAAGAACA (2) CCAAGCTTGA (2) CTGTACCAGT (2) CTGTGCCAAT (2) GGGATTCATT
| 17.7 | 0.0177 |
| 3T3 fibroblasts | AGCCTGAACA CCAAGCTTGA (2)
| 10.5 | 0.0105 |
| E15 cortex | ACTGACTCCA (2) CCAAGCTTGA (2)
| 9.8 | 0.0098 |
| P1 cortex | CCAAGCTTGA (2)
| 13.6 | 0.0136 |
| Hypothalamus | AGCCTGAACA
| 9.1 | 0.0091 |
| E12.5 retina | GCAAGGAAAC (2)
| 5.6 | 0.0056 |
| E14.5 retina | CCAAGCTTGA (2) GGGATTCATT
| 5.4 | 0.0054 |
| E16.5 retina | CCAAGCTTGA (2) CTGTGCCAAT (2)
| 5.4 | 0.0054 |
| E18.5 retina | AGCCTGAACA GGGATTCATT
| 5.4 | 0.0054 |
| P0.5 retina | AGCCTGAACA CCAAGCTTGA (2)
| 9.9 | 0.0099 |
| P2.5 retina | AGCCTGAACA CTGTGCCAAT (2) GGGATTCATT
| 10.6 | 0.0106 |
| P4.5 retina | CCAAGCTTGA (2)
| 2 | 0.002 |
| P6.5 retina | AGCCTGAACA CTGTGCCAAT (2)
| 8.4 | 0.0084 |
| P10.5 crx- retina | AGCCTGAACA CTGGGAAGGG
| 16.8 | 0.0168 |
| P10.5 crx+ retina | AGCCTGAACA CTGGGAAGGG
| 15.4 | 0.0154 |
| Adult retinal | AGCCTGAACA CCAAGCTTGA (2) CTGTGCCAAT (2)
| 16.7 | 0.0167 |
| ONL | AGCCTGAACA CCAAGCTTGA (2)
| 13.4 | 0.0134 |