Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.39082
A230108M10Rik
RIKEN cDNA A230108M10 gene
12
78429
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 40 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GACTGGCCCT
GATTTTATTT (
2
)
GCGTCTTGGG
TGTCTTTATA
24.5
0.0245
Cb medulloblastoma
ATGTGAGGGC
GACTGGCCCT
GATTTTATTT (
2
)
20.8
0.0208
P8 GC+1d culture
GACTGGCCCT
GATTTTATTT (
2
)
TGTCTTTATA
19.4
0.0194
P8 GC+SHH+1d culture
GATTTTATTT (
2
)
TGTCTTTATA
31.6
0.0316
3T3 fibroblasts
GACTGGCCCT
3.5
0.0035
E15 cortex
GATTTTATTT (
2
)
9.9
0.0099
P1 cortex
GATTTTATTT (
2
)
TGTCTTTATA
13.6
0.0136
Hypothalamus
GATTTTATTT (
2
)
10.9
0.0109
E12.5 retina
GATTTTATTT (
2
)
TGTCTTTATA
11.3
0.0113
E14.5 retina
GATTTTATTT (
2
)
12.8
0.0128
E16.5 retina
GATTTTATTT (
2
)
TGTCTTTATA
5.4
0.0054
E18.5 retina
GATTTTATTT (
2
)
TGTCTTTATA
21.8
0.0218
P0.5 retina
GACTGGCCCT
GATTTTATTT (
2
)
9.8
0.0098
P2.5 retina
GACTGGCCCT
GATTTTATTT (
2
)
14.1
0.0141
P4.5 retina
GATTTTATTT (
2
)
13.9
0.0139
P6.5 retina
GATTTTATTT (
2
)
TGTCTTTATA
8.3
0.0083
P10.5 crx- retina
GATTTTATTT (
2
)
18.6
0.0186
P10.5 crx+ retina
GATTTTATTT (
2
)
GCGTCTTGGG
TGTCTTTATA
13.5
0.0135
Adult retinal
GACTGGCCCT
GATTTTATTT (
2
)
GCGTCTTGGG
7.5
0.0075
ONL
GATTTTATTT (
2
)
TGTCTTTATA
11.5
0.0115
