Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.39088	BB176347	expressed sequence BB176347	8		102365
Mm.39088	Sox1	SRY-box containing gene 1	8	8 4.0 cM	20664
Mm.39088	Sox11	SRY-box containing gene 11	12	12	20666
Gene Ontology	DNA binding | nucleus | regulation of transcription, DNA-dependent | transcription factor activity | transcription factor complex
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 6 In Situ Hybridization Images

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SAGE Tags

Total 16 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CAAATATGTT (6) 11.4 0.0114 P8 GC+1d culture CAAATATGTT (6) GCCCTGGCTT (3) 9.1 0.0091 P8 GC+SHH+1d culture AGACTGTGTG CAAATATGTT (6) 5.9 0.0059 E15 cortex CAAATATGTT (6) GCCCTGGCTT (3) 29.6 0.0296 P1 cortex CAAATATGTT (6) 9.1 0.0091 Hypothalamus GCCCTGGCTT (3) 1.8 0.0018 E12.5 retina CAAATATGTT (6) 3.8 0.0038 E14.5 retina AGACTGTGTG 1.8 0.0018 E16.5 retina CAAATATGTT (6) 5.4 0.0054 E18.5 retina CAAATATGTT (6) 1.8 0.0018 P10.5 crx- retina AGACTGTGTG CAAATATGTT (6) 3.8 0.0038 P10.5 crx+ retina AGACTGTGTG 1.9 0.0019