Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.3914	Slc12a1	solute carrier family 12, member 1	2	2 69.5 cM	20495
Gene Ontology	amino acid transport | amino acid-polyamine transporter activity | carrier activity | cation:chloride symporter activity | chloride transport | integral to membrane | integral to plasma membrane | ion transport | membrane | potassium ion transport | sodium ion transport | symporter activity | transport | transporter activity
Human Homolog	SLC12A1[solute carrier family 12 (sodium/potassium/chloride transporters), member 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 57 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GCCCTGGTGC (2) TAAAAGAAAA TGTATCTTTT (3) 26.1 0.0261 Cb medulloblastoma GCCCTGGTGC (2) TAAAAGAAAA 117.9 0.1179 P8 GC+1d culture GCAGTGCGGG GCCCTGGTGC (2) TAAAAGAAAA 71.9 0.0719 P8 GC+SHH+1d culture GCAGTGCGGG GCCCTGGTGC (2) GTGGGATCCG TAAAAGAAAA TGTATCTTTT (3) 87.8 0.0878 3T3 fibroblasts GCCCTGGTGC (2) 3.5 0.0035 E15 cortex GCCCTGGTGC (2) TAAAAGAAAA 29.7 0.0297 P1 cortex TAAAAGAAAA 13.6 0.0136 Hypothalamus GCAGTGCGGG GCCCTGGTGC (2) TAAAAGAAAA TGTATCTTTT (3) 36.2 0.0362 E12.5 retina GCCCTGGTGC (2) TAAAAGAAAA TGTATCTTTT (3) 31.9 0.0319 E14.5 retina GCAGTGCGGG GCCCTGGTGC (2) TAAAAGAAAA TGTATCTTTT (3) 41.9 0.0419 E16.5 retina GCAGTGCGGG GCCCTGGTGC (2) TAAAAGAAAA 45.2 0.0452 E18.5 retina GCCCTGGTGC (2) TAAAAGAAAA 41.8 0.0418 P0.5 retina GCCCTGGTGC (2) TAAAAGAAAA 45.2 0.0452 P2.5 retina GCCCTGGTGC (2) TAAAAGAAAA TGTATCTTTT (3) 65.2 0.0652 P4.5 retina GCAGTGCGGG GCCCTGGTGC (2) TAAAAGAAAA TGTATCTTTT (3) 103.1 0.1031 P6.5 retina GCCCTGGTGC (2) TAAAAGAAAA TGTATCTTTT (3) 80 0.08 P10.5 crx- retina GCAGTGCGGG GCCCTGGTGC (2) TAAAAGAAAA 74.2 0.0742 P10.5 crx+ retina GCCCTGGTGC (2) GTGGGATCCG TAAAAGAAAA TGTATCTTTT (3) 53.8 0.0538 Adult retinal GCAGTGCGGG GCCCTGGTGC (2) TAAAAGAAAA 22.3 0.0223 ONL GCCCTGGTGC (2) TAAAAGAAAA 49.8 0.0498