Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.39253
Mapk10
mitogen activated protein kinase 10
5
26414
Mm.39253
2900063K03Rik
RIKEN cDNA 2900063K03 gene
5
72975
Mm.39253
C230008H04Rik
RIKEN cDNA C230008H04 gene
5
319641
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 34 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CACACACACA (
2
)
11.4
0.0114
Cb medulloblastoma
CACACACACA (
2
)
TGATCTATTA
(
3
)
37
0.037
P8 GC+1d culture
CACACACACA (
2
)
GAAGTGGTGT
7.9
0.0079
P8 GC+SHH+1d culture
CACACACACA (
2
)
GAAGTGGTGT
10.6
0.0106
3T3 fibroblasts
CACACACACA (
2
)
17.5
0.0175
E15 cortex
CACACACACA (
2
)
4.9
0.0049
P1 cortex
CACACACACA (
2
)
GAAGTGGTGT
36.4
0.0364
Hypothalamus
CACACACACA (
2
)
96
0.096
E12.5 retina
CACACACACA (
2
)
3.8
0.0038
E14.5 retina
CACACACACA (
2
)
18.2
0.0182
E16.5 retina
CACACACACA (
2
)
GAAGTGGTGT
16.3
0.0163
E18.5 retina
CACACACACA (
2
)
5.5
0.0055
P0.5 retina
AGCAAAAGCA (
2
)
CACACACACA (
2
)
TGATCTATTA
(
3
)
11.9
0.0119
P2.5 retina
CACACACACA (
2
)
GAAGTGGTGT
22.9
0.0229
P4.5 retina
AGCAAAAGCA (
2
)
CACACACACA (
2
)
9.9
0.0099
P6.5 retina
CACACACACA (
2
)
8.3
0.0083
P10.5 crx- retina
CACACACACA (
2
)
GAAGTGGTGT
7.5
0.0075
P10.5 crx+ retina
CACACACACA (
2
)
GAAGTGGTGT
13.5
0.0135
Adult retinal
AGCAAAAGCA (
2
)
CACACACACA (
2
)
GAAGTGGTGT
TGATCTATTA
(
3
)
22.4
0.0224
ONL
CACACACACA (
2
)
21.1
0.0211
