| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AGCCTCAAGG (2) AGCTGCTGGC CCTTTGAGCA GACTTGGACA GGCCAGCCTT (3) GGGGCTTTGC
| 19.6 | 0.0196 |
| Cb medulloblastoma | AGCTGCTGGC CCTTTGAGCA GGCCAGCCTT (3)
| 23.1 | 0.0231 |
| P8 GC+1d culture | AGCCTCAAGG (2) AGCTGCTGGC CCTTTGAGCA GACTTCCTGT (3) GGGGCTTTGC
| 13.7 | 0.0137 |
| P8 GC+SHH+1d culture | AGCCTCAAGG (2) AGCTGCTGGC CCTTTGAGCA GGCCAGCCTT (3) GGGGCTTTGC
| 22.2 | 0.0222 |
| 3T3 fibroblasts | AGCCTCAAGG (2) AGCTGCTGGC CCTTTGAGCA GGCCAGCCTT (3) GGGGCTTTGC
| 38.5 | 0.0385 |
| E15 cortex | AGCTGCTGGC GACTTGGACA GGCAGCAGAG
| 19.7 | 0.0197 |
| P1 cortex | CCTTTGAGCA GACTTGGACA GGCCAGCCTT (3) GGGGCTTTGC
| 27.1 | 0.0271 |
| Hypothalamus | AGCCTCAAGG (2) AGCTGCTGGC CCTTTGAGCA GGCAGCAGAG GGCCAGCCTT (3) GGGGCTTTGC TACCACGCAC (2)
| 19.8 | 0.0198 |
| E12.5 retina | AGCCTCAAGG (2) AGCTGCTGGC CCTTTGAGCA GACTTGGACA
| 15.1 | 0.0151 |
| E14.5 retina | AGCCTCAAGG (2) CCTTTGAGCA GACTTGGACA GGGGCTTTGC
| 9 | 0.009 |
| E16.5 retina | AGCCTCAAGG (2) AGCTGCTGGC CCTTTGAGCA GACTTGGACA GACTTGGCCA (2) GGCCAGCCTT (3) TACCACGCAC (2)
| 21.7 | 0.0217 |
| E18.5 retina | AGCCTCAAGG (2) AGCTGCTGGC CCTTTGAGCA
| 12.7 | 0.0127 |
| P0.5 retina | AGCCTCAAGG (2) AGCTGCTGGC CCTTTGAGCA GGCCAGCCTT (3) GGGGCTTTGC
| 29.5 | 0.0295 |
| P2.5 retina | AGCCTCAAGG (2) CCTTTGAGCA GACTTGGACA GGCACCCACA GGCAGCAGAG GGCCAGCCTT (3)
| 19.5 | 0.0195 |
| P4.5 retina | AGCCTCAAGG (2) CCTTTGAGCA GACTTGGACA GGCCAGCCTT (3)
| 19.8 | 0.0198 |
| P6.5 retina | AGCCTCAAGG (2) CCTTTGAGCA GGCCAGCCTT (3)
| 13.4 | 0.0134 |
| P10.5 crx- retina | AGCCTCAAGG (2) AGCTGCTGGC CCTTTGAGCA GACTTGGCCA (2) GGCCAGCCTT (3)
| 18.7 | 0.0187 |
| P10.5 crx+ retina | AGCCTCAAGG (2) CCTTTGAGCA GACTTCCTGT (3) GACTTGGCCA (2) GGCCAGCCTT (3) GGGGCTTTGC
| 32.6 | 0.0326 |
| Adult retinal | AGCCTCAAGG (2) CCTTTGAGCA GACTTGGACA GGGGCTTTGC
| 16.8 | 0.0168 |
| ONL | AGCCTCAAGG (2) CCTTTGAGCA GACTTCCTGT (3) GGCACCCACA GGCAGCAGAG
| 13.3 | 0.0133 |