Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.3970	Elavl4	ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)	4	4 49.5 cM	15572
Gene Ontology	RNA binding
Human Homolog	ELAVL4[ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 62 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AATGCTTAGC (2) CTCTTCCCTG (2) GACTTTATAA (2) TTAATCTTGC TTTGTTGTGA 19.6 0.0196 Cb medulloblastoma AATGCTTAGC (2) ACAATATATC TAATAATAAT (3) TTAATCTTGC 13.8 0.0138 P8 GC+1d culture AATGCTTAGC (2) ACAATATATC CTCTTCCCTG (2) GACTTTATAA (2) TTAATCTTGC TTTGTTGTGA 19.4 0.0194 P8 GC+SHH+1d culture AATGCTTAGC (2) CTCTTCCCTG (2) GACTTTATAA (2) TTAATCTTGC 10.6 0.0106 3T3 fibroblasts GAGACAGGGG 3.5 0.0035 P1 cortex AACTCTTGTA (2) AATGCTTAGC (2) GACTTTATAA (2) TAATAATAAT (3) TTAATCTTGC 27.1 0.0271 Hypothalamus GACTTTATAA (2) TAATAATAAT (3) TTAATCTTGC TTTGTTGTGA 12.6 0.0126 E12.5 retina CTCTTCCCTG (2) GACTTTATAA (2) TTAATCTTGC TTTGTTGTGA 11.3 0.0113 E14.5 retina GACTTTATAA (2) GAGACAGGGG TAATAATAAT (3) TTAATCTTGC 18.1 0.0181 E16.5 retina CTCTTCCCTG (2) GACTTTATAA (2) TTAATCTTGC TTTGTTGTGA 12.6 0.0126 E18.5 retina CTCTTCCCTG (2) GACTTTATAA (2) TAATAATAAT (3) 9 0.009 P0.5 retina AACTCTTGTA (2) AATGCTTAGC (2) GACTTTATAA (2) 7.9 0.0079 P2.5 retina GACTTTATAA (2) GAGACAGGGG 3.6 0.0036 P4.5 retina ACAATATATC GACTTTATAA (2) TAATAATAAT (3) TTAATCTTGC 11.9 0.0119 P6.5 retina GAGACAGGGG TAATAATAAT (3) TTTGTTGTGA 8.3 0.0083 P10.5 crx- retina TAATAATAAT (3) TTAATCTTGC 7.5 0.0075 P10.5 crx+ retina GACTTTATAA (2) TTAATCTTGC 3.8 0.0038 ONL GAGACAGGGG TAATAATAAT (3) 7.6 0.0076