Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.3974	Usp4	ubiquitin specific protease 4 (proto-oncogene)	9	9 60.0 cM	22258
Gene Ontology	cell growth and/or maintenance | cysteine-type endopeptidase activity | cysteine-type peptidase activity | hydrolase activity | nucleus | peptidase activity | ubiquitin cycle | ubiquitin thiolesterase activity | ubiquitin-dependent protein catabolism
Human Homolog	USP4[ubiquitin specific protease 4 (proto-oncogene)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 69 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAGACCCACC (2) GACACCAACT (2) GCCTGTTTGT 14.6 0.0146 Cb medulloblastoma AAGACCCACC (2) GACACCAACT (2) GCCTGTTTGT GGGGATGAGG (6) 25.4 0.0254 P8 GC+1d culture AAGACCCACC (2) CCACTGTGCA GACACCAACT (2) GCCTGTTTGT 21.7 0.0217 P8 GC+SHH+1d culture AAGACCCACC (2) CCACTGTGCA GCCTGTTTGT GGCCCGGCAG (3) 18.7 0.0187 3T3 fibroblasts GCCTGTTTGT 3.5 0.0035 E15 cortex AAGACCCACC (2) GCCTGTTTGT TAGATGCTGG 14.7 0.0147 P1 cortex AAGACCCACC (2) GCCTGTTTGT 18.2 0.0182 Hypothalamus AAGACCCACC (2) GACACCAATG GCCTGTTTGT GGCCCGGCAG (3) GTCTGTTTGT (3) 16.2 0.0162 E12.5 retina AAGACCCACC (2) GCCTGTTTGT GGGGATGAGG (6) 24.4 0.0244 E14.5 retina AAGACCCACC (2) CCACTGTGCA GCCTGTTTGT TAGATGCTGG 36.4 0.0364 E16.5 retina AAGACCCACC (2) GCCTGTTTGT GTCTGTTTGT (3) TAGATGCTGG 25.3 0.0253 E18.5 retina GCCTGTTTGT TAGATGCTGG 12.7 0.0127 P0.5 retina AAGACCCACC (2) GCCTGTTTGT GGGGATGAGG (6) 15.7 0.0157 P2.5 retina GCCTGTTTGT TAGATGCTGG 21.2 0.0212 P4.5 retina AAGACCCACC (2) GACACCAATG GCCTGTTTGT 33.7 0.0337 P6.5 retina AAGACCCACC (2) CCACTGTGCA GACACCAATG GCCTGTTTGT 16.7 0.0167 P10.5 crx- retina AAGACCCACC (2) GACACCAATG GCCTGTTTGT GGCCCGGCAG (3) 11.3 0.0113 P10.5 crx+ retina AAGACCCACC (2) CCACTGTGCA GCCTGTTTGT GGGGATGAGG (6) 19.2 0.0192 Adult retinal AAGACCCACC (2) GACACCAATG GCCTGTTTGT GGCCCGGCAG (3) GTCTGTTTGT (3) 26.1 0.0261 ONL AAGACCCACC (2) CCACTGTGCA GACACCAACT (2) GCCTGTTTGT GGGGATGAGG (6) 32.4 0.0324