| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | GGACAGAAGC (4) GGACAGACGC (3)
| 6.5 | 0.0065 |
| Cb medulloblastoma | GTGCGATGCT
| 6.9 | 0.0069 |
| P8 GC+1d culture | CAGCACGCTG GGACAGAAGC (4) GGACAGACGC (3) GTGCGATGCT
| 7.9 | 0.0079 |
| P8 GC+SHH+1d culture | GGACAGAAGC (4) GTGCGATGCT
| 4.7 | 0.0047 |
| 3T3 fibroblasts | CAGCACGCTG GGACAGAAGC (4) GGACAGACGC (3) GTGCGATGCT
| 31.5 | 0.0315 |
| E15 cortex | GTGCGATGCT
| 4.9 | 0.0049 |
| P1 cortex | CAGCACGCTG
| 4.5 | 0.0045 |
| Hypothalamus | AGGGCGGGCC (2) CAGCACGCTG GTGCGATGCT
| 10.8 | 0.0108 |
| E12.5 retina | CAGCACGCTG GGACAGAAGC (4) GGACAGACGC (3) GTGCGATGCT
| 7.6 | 0.0076 |
| E14.5 retina | CAGCACGCTG GTGCGATGCT
| 5.4 | 0.0054 |
| E16.5 retina | CAGCACGCTG GGACAGAAGC (4)
| 5.4 | 0.0054 |
| P0.5 retina | CAGCACGCTG GGACAGAAGC (4) GGACAGACGC (3) GTGCGATGCT
| 11.8 | 0.0118 |
| P2.5 retina | CAGCACGCTG GTGCGATGCT
| 3.6 | 0.0036 |
| P4.5 retina | CAGCACGCTG GGACAGAAGC (4) GTGCGATGCT
| 10 | 0.01 |
| P6.5 retina | CAGCACGCTG
| 3.3 | 0.0033 |
| P10.5 crx- retina | CAGCACGCTG GGACAGAAGC (4)
| 5.6 | 0.0056 |
| P10.5 crx+ retina | AGGGCGGGCC (2) CAGCACGCTG GGACAGAAGC (4)
| 7.6 | 0.0076 |
| Adult retinal | AGGGCGGGCC (2) CAGCACGCTG GGACAGAAGC (4) GTGCGATGCT
| 11.2 | 0.0112 |
| ONL | CAGCACGCTG GGACAGAAGC (4) GGACAGACGC (3)
| 5.7 | 0.0057 |