Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.3996	Chuk	conserved helix-loop-helix ubiquitous kinase	19	19 45.0 cM	12675
Gene Ontology	ATP binding | cytoplasm | I-kappaB phosphorylation | kinase activity | morphogenesis of an epithelial sheet | odontogenesis (sensu Vertebrata) | protein amino acid phosphorylation | protein binding | protein kinase activity | protein serine/threonine kinase activity | protein-tyrosine kinase activity | receptor signaling protein serine/threonine kinase activity | transferase activity
Human Homolog	CHUK[conserved helix-loop-helix ubiquitous kinase]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 49 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GGAATGTTGT 1.6 0.0016 Cb medulloblastoma AATCAATAAA (6) GTAGTCAGAT 9.2 0.0092 P8 GC+1d culture AAGTTAAAAA (3) GAGCTGCAGA (3) GAGTCAGATG GGGTGGGAAA GGTTTATTTG (2) 7.9 0.0079 P8 GC+SHH+1d culture AAGTTAAAAA (3) GAGTCAGATG GGGTGGGAAA GGTTTATTTG (2) GTAGTCAGAT 7.1 0.0071 E15 cortex GGGTGGGAAA 4.9 0.0049 P1 cortex ATTTTTTATT (2) GAGCTGCAGA (3) 18.2 0.0182 Hypothalamus AATCAATAAA (6) GAGTCAGATG 5.4 0.0054 E12.5 retina AATCAATAAA (6) GGGTGGGAAA 5.7 0.0057 E14.5 retina AAGTTAAAAA (3) GGAATGTTGT GTAGTCAGAT 5.4 0.0054 E16.5 retina AAGTTAAAAA (3) AATCAATAAA (6) ATTACGCCAA 7.2 0.0072 E18.5 retina GGAATGTTGT GGTTTATTTG (2) 3.6 0.0036 P0.5 retina AAGTTAAAAA (3) ATTACGCCAA GAGTCAGATG GGGTGGGAAA 11.8 0.0118 P2.5 retina AAGTTAAAAA (3) AATCAATAAA (6) ATTTTTTATT (2) GGGTGGGAAA GGTTTATTTG (2) 12.5 0.0125 P4.5 retina AAGTTAAAAA (3) GAGTCAGATG 4 0.004 P6.5 retina AAGTTAAAAA (3) ATTTTTTATT (2) GAGTCAGATG GGGTGGGAAA 15 0.015 P10.5 crx- retina GAGTCAGATG 1.9 0.0019 P10.5 crx+ retina GAGCTGCAGA (3) 1.9 0.0019 Adult retinal ATTACGCCAA GAGTCAGATG GGGTGGGAAA 9.3 0.0093 ONL AAGTTAAAAA (3) 1.9 0.0019