| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AAATGTGAAT (2) GAACACTGCA TGGTTGCCTG
| 11.4 | 0.0114 |
| Cb medulloblastoma | AAATGTGAAT (2) ACAAAACCAA GAACACTGCA GCTGCCCAGC
| 11.5 | 0.0115 |
| P8 GC+1d culture | AAATGTGAAT (2) GCTGCCCAGC
| 6.8 | 0.0068 |
| P8 GC+SHH+1d culture | AAATGTGAAT (2) ACAAAACCAA TTTCAAAGAA (2)
| 11.8 | 0.0118 |
| E15 cortex | ACAAAACCAA
| 4.9 | 0.0049 |
| P1 cortex | AAATGTGAAT (2)
| 4.5 | 0.0045 |
| Hypothalamus | AAATGTGAAT (2) ACAAAACCAA
| 3.6 | 0.0036 |
| E12.5 retina | AAATGTGAAT (2) GCTGCCCAGC
| 13.2 | 0.0132 |
| E14.5 retina | AAATGTGAAT (2) ACAAAACCAA GCTGCCCAGC
| 30.9 | 0.0309 |
| E16.5 retina | AAATGTGAAT (2) ACAAAACCAA TGGTTGCCTG
| 5.4 | 0.0054 |
| E18.5 retina | AAATGTGAAT (2) ACAAAACCAA GAACACTGCA GAGAGAATGC (2) TTTCAAAGAA (2)
| 16.4 | 0.0164 |
| P0.5 retina | AAATGTGAAT (2)
| 3.9 | 0.0039 |
| P2.5 retina | AAATGTGAAT (2) GCTGCCCAGC TTTCAAAGAA (2)
| 12.4 | 0.0124 |
| P4.5 retina | AAATGTGAAT (2) GAGAGAATGC (2)
| 9.9 | 0.0099 |
| P6.5 retina | AAATGTGAAT (2) ACAAAACCAA AGACCATCTC
| 10 | 0.01 |
| P10.5 crx- retina | AAATGTGAAT (2)
| 3.7 | 0.0037 |
| P10.5 crx+ retina | AAATGTGAAT (2) GCTGCCCAGC
| 5.7 | 0.0057 |
| Adult retinal | AAATGTGAAT (2) ACAAAACCAA AGACCATCTC GAACACTGCA
| 18.7 | 0.0187 |
| ONL | AAATGTGAAT (2) ACAAAACCAA GAGAGAATGC (2) TGGTTGCCTG
| 57.4 | 0.0574 |