| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | ATTGGTGTCT (4) GAAAATTAAA (3) TGACTGAGAG
| 4.8 | 0.0048 |
| Cb medulloblastoma | GAAAATTAAA (3) GAGACTTGAG (5) GGGGAGGGGG (4)
| 18.5 | 0.0185 |
| P8 GC+1d culture | ATTGGTGTCT (4) GAAAATTAAA (3)
| 4.5 | 0.0045 |
| P8 GC+SHH+1d culture | ATTGGTGTCT (4) GAAAATTAAA (3) GGGGAGGGGG (4)
| 4.7 | 0.0047 |
| E15 cortex | TGACTGAGAG
| 4.9 | 0.0049 |
| P1 cortex | ATTGGTGTCT (4)
| 4.5 | 0.0045 |
| Hypothalamus | ATTGGTGTCT (4) GAAAATTAAA (3) GGGGAGGGGG (4)
| 12.6 | 0.0126 |
| E12.5 retina | GAAAATTAAA (3) GGGGAGGGGG (4) TATGTTATTA (3)
| 11.3 | 0.0113 |
| E14.5 retina | GAAAATTAAA (3) GGGGGGTTTT TATGTTATTA (3)
| 5.4 | 0.0054 |
| E16.5 retina | ATTGGTGTCT (4) GAAAATTAAA (3)
| 3.6 | 0.0036 |
| P0.5 retina | GAGACTTGAG (5) GGGGGGTTTT
| 5.9 | 0.0059 |
| P2.5 retina | GAAAATTAAA (3) GGGGAGGGGG (4) GGGGGGTTTT
| 7.1 | 0.0071 |
| P4.5 retina | GAAAATTAAA (3) TGACTGAGAG
| 4 | 0.004 |
| P6.5 retina | GGGGGGTTTT
| 1.7 | 0.0017 |
| P10.5 crx- retina | ATTGGTGTCT (4) GAAAATTAAA (3) TGACTGAGAG
| 9.3 | 0.0093 |
| P10.5 crx+ retina | GAAAATTAAA (3) GGGGAGGGGG (4) TATGTTATTA (3)
| 7.6 | 0.0076 |
| Adult retinal | GGGGAGGGGG (4)
| 3.7 | 0.0037 |
| ONL | GGGGAGGGGG (4)
| 1.9 | 0.0019 |