Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.41187	1200009O22Rik	RIKEN cDNA 1200009O22 gene	6		66873
Human Homolog	KIAA0644[KIAA0644 gene product]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 90 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ACCAGAACGC CACAGCACAG (2) CATTGCCTTC CCTTCTCAGA (2) GGAAAAAAAA (2) GGAAAAAATC TGCATTCAAC (2) TTTGAGGTCT 50.5 0.0505 Cb medulloblastoma CATTGCCTTC CCTTCTCAGA (2) GGAAAAAAAA (2) TTTGAGGTCT 53.1 0.0531 P8 GC+1d culture CATTGCCTTC CCTTCTCAGA (2) GGAAAAAAAA (2) TGCATTCAAC (2) TTTGAGGTCT 26.2 0.0262 P8 GC+SHH+1d culture CATTGCCTTC CCTTCTCAGA (2) GGAAAAAAAA (2) GGAAAAAATC TGAAGTGATC (2) TTTGAGGTCT 30.5 0.0305 3T3 fibroblasts CCTTCTCAGA (2) 3.5 0.0035 E15 cortex CATTGCCTTC CCTTCTCAGA (2) GGAAAAAAAA (2) GGTCCCTTCC (2) 29.6 0.0296 P1 cortex CCTTCTCAGA (2) GGAAAAAAAA (2) 13.6 0.0136 Hypothalamus ACCAGAACGC CATTGCCTTC CCTTCTCAGA (2) GGAAAAAAAA (2) TTTGAGGTCT 25.3 0.0253 E12.5 retina CACAGCACAG (2) CATTGCCTTC GGAAAAAAAA (2) 9.4 0.0094 E14.5 retina CATTGCCTTC GGAAAAAAAA (2) TTTGAGGTCT 18.2 0.0182 E16.5 retina CATTGCCTTC CCTTCTCAGA (2) GGAAAAAAAA (2) GGAAAAAATC GGTCCCTTCC (2) TTTGAGGTCT 16.2 0.0162 E18.5 retina CATTGCCTTC GGAAAAAAAA (2) GGAAAAAAAT (2) TGAAGTGATC (2) 27.3 0.0273 P0.5 retina ACCAGAACGC CATTGCCTTC CCTTCTCAGA (2) GGAAAAAAAA (2) 25.5 0.0255 P2.5 retina CACAGCACAG (2) CATTGCCTTC CCTTCTCAGA (2) GGAAAAAAAA (2) GGAAAAAAAT (2) TGAAGTGATC (2) TTTGAGGTCT 33.4 0.0334 P4.5 retina CACAGCACAG (2) CATTGCCTTC GGAAAAAAAA (2) TTTGAGGTCT 31.8 0.0318 P6.5 retina CACAGCACAG (2) CATTGCCTTC GGAAAAAAAA (2) GGAAAAAAAT (2) GGTCCCTTCC (2) TTTGAGGTCT 40 0.04 P10.5 crx- retina CACAGCACAG (2) CATTGCCTTC CCTTCTCAGA (2) GGAAAAAAAA (2) TGCATTCAAC (2) TTTGAGGTCT 22.4 0.0224 P10.5 crx+ retina CACAGCACAG (2) CATTGCCTTC CCTTCTCAGA (2) GGAAAAAAAA (2) TTTGAGGTCT 36.4 0.0364 Adult retinal CATTGCCTTC CCTTCTCAGA (2) GGAAAAAAAA (2) TTTGAGGTCT 20.5 0.0205 ONL CATTGCCTTC GGAAAAAAAA (2) GGAAAAAAAT (2) 34.4 0.0344