| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | TTCTCAGCTG (3)
| 8.2 | 0.0082 |
| Cb medulloblastoma | GGCACTGTCC TAGGCCCGTG
| 6.9 | 0.0069 |
| P8 GC+1d culture | GGCACTGTCC TAGGCCCGTG TGTGGTAGAG TTCTCAGCTG (3)
| 11.4 | 0.0114 |
| P8 GC+SHH+1d culture | GGCACTGTCC TGTGGTAGAG TTCTCAGCTG (3)
| 11.7 | 0.0117 |
| E15 cortex | GGCACTGTCC
| 14.8 | 0.0148 |
| Hypothalamus | TGTGGTAGAG
| 1.8 | 0.0018 |
| E12.5 retina | GGCACTGTCC TGTGGTAGAG TTTAATAAAG (6)
| 30.1 | 0.0301 |
| E14.5 retina | GGCACTGTCC TTCTCAGCTG (3) TTTAATAAAG (6)
| 7.2 | 0.0072 |
| E16.5 retina | TGTGGTAGAG TTCTCAGCTG (3)
| 5.4 | 0.0054 |
| E18.5 retina | TTCTCAGCTG (3) TTTAATAAAG (6)
| 3.6 | 0.0036 |
| P0.5 retina | GGCACTGTCC TGTGGTAGAG
| 13.8 | 0.0138 |
| P2.5 retina | GGCACTGTCC TTCTCAGCTG (3) TTTAATAAAG (6)
| 14 | 0.014 |
| P4.5 retina | TTCTCAGCTG (3)
| 2 | 0.002 |
| P6.5 retina | GGCACTGTCC TAGGCCCGTG TGTGGTAGAG
| 16.7 | 0.0167 |
| P10.5 crx- retina | GGCACTGTCC TGTGGTAGAG
| 3.8 | 0.0038 |
| P10.5 crx+ retina | GGCACTGTCC TGTGGTAGAG TTCTCAGCTG (3)
| 5.7 | 0.0057 |
| Adult retinal | GGCACTGTCC TAGGCCCGTG TGTGGTAGAG
| 5.7 | 0.0057 |