Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.41220	0710001D07Rik	RIKEN cDNA 0710001D07 gene	17		67679
Mm.41220	Btbd9	BTB (POZ) domain containing 9	17		224671
Gene Ontology	cell adhesion | protein binding
Human Homolog	BTBD9[BTB (POZ) domain containing 9]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 5 In Situ Hybridization Images

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SAGE Tags

Total 142 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ATCCAAGTCA (3) ATTTAAAAAA (3) CCTTTGATCC (4) GTAGATGTGG (2) GTGGCTTACA TGGAACGATA (2) TGGTTGCTGG 89.6 0.0896 Cb medulloblastoma ATTTAAAAAA (3) ATTTAAAAGA (2) CCTTTGATCC (4) GTGGCTTACA TGGAACGATA (2) TGGTTGCTGG 145.6 0.1456 P8 GC+1d culture ATCCAAGTCA (3) ATTTAAAAAA (3) CCTTTGATCC (4) CTCCTCAGAT (2) GTGGCTTACA TGCACATTTT (2) TGGAACGATA (2) TGGTTGCTGG 103.7 0.1037 P8 GC+SHH+1d culture ACCTAAAAAA ATCCAAGTCA (3) ATTTAAAAAA (3) CCTTTGATCC (4) CTCCTCAGAT (2) GGGGGGAAAG GTGGCTTACA TGGAACGATA (2) TGGTTGCTGG 137 0.137 3T3 fibroblasts ATCCAAGTCA (3) GGGGGGAAAG GTAGATGTGG (2) GTGGCTTACA TGGTTGCTGG 266.3 0.2663 E15 cortex ATTACAGCCA (2) GGGGGGAAAG GTGGCTTACA TGGTTGCTGG 311.7 0.3117 P1 cortex ATCCAAGTCA (3) ATTACAGCCA (2) ATTTAAAAAA (3) CCTTTGATCC (4) GGAAGTCCTC GTAGATGTGG (2) GTGGCTTACA TGGTTGCTGG 154.4 0.1544 Hypothalamus ATTACAGCCA (2) ATTTAAAAAA (3) GTAGATGTGG (2) GTGGCTTACA TGGAACGATA (2) TGGTTGCTGG 380.3 0.3803 E12.5 retina ATCCAAGTCA (3) ATTTAAAAAA (3) ATTTAAAAGA (2) CCTTTGATCC (4) GGGGGGAAAG GTGGCTTACA TGGAACGATA (2) TGGTTGCTGG 223.5 0.2235 E14.5 retina ATTTAAAAAA (3) CCTTTGATCC (4) GGGGGGAAAG GTAGATGTGG (2) GTGGCTTACA TGGAACGATA (2) TGGTTGCTGG 1000.1 1.0001 E16.5 retina CCTTTGATCC (4) GGAAGTCCTC GTGGCTTACA TCATCCGTAA (2) TGGAACGATA (2) TGGTTGCTGG TTTCCAGGGG 836.6 0.8366 E18.5 retina ACCTAAAAAA ATTTAAAAAA (3) CCTTTGATCC (4) GGGGGGAAAG GTAGATGTGG (2) GTGGCTTACA TGGAACGATA (2) TGGTTGCTGG TTTCCAGGGG 318.2 0.3182 P0.5 retina ATCCAAGTCA (3) CCTTTGATCC (4) GGAAGTCCTC GTAGATGTGG (2) GTGGCTTACA TGCACATTTT (2) TGGTTGCTGG TTTCCAGGGG 249.4 0.2494 P2.5 retina CCTTTGATCC (4) CTCCTCAGAT (2) GGGGGGAAAG GTAGATGTGG (2) GTGGCTTACA TGGAACGATA (2) TGGTTGCTGG 209.4 0.2094 P4.5 retina ATTTAAAAAA (3) ATTTAAAAGA (2) CCTTTGATCC (4) GTAGATGTGG (2) GTGGCTTACA TGGAACGATA (2) TGGTTGCTGG 200.2 0.2002 P6.5 retina ATCCAAGTCA (3) ATTTAAAAAA (3) CCTTTGATCC (4) GGGGGGAAAG GTAGATGTGG (2) GTGGCTTACA TGGAACGATA (2) TGGTTGCTGG 211.7 0.2117 P10.5 crx- retina ATCCAAGTCA (3) ATTTAAAAGA (2) GTAGATGTGG (2) GTGGCTTACA TGGTTGCTGG 315.9 0.3159 P10.5 crx+ retina ATTTAAAAAA (3) CCTTTGATCC (4) GGGGGGAAAG GTAGATGTGG (2) GTGGCTTACA TGGAACGATA (2) TGGTTGCTGG 159.6 0.1596 Adult retinal ATCCAAGTCA (3) GGAAGTCCTC GTAGATGTGG (2) GTGGCTTACA TCATCCGTAA (2) TGCACATTTT (2) TGGAACGATA (2) TGGTTGCTGG 257.5 0.2575 ONL ATTACAGCCA (2) ATTTAAAAAA (3) CCTTTGATCC (4) GTAGATGTGG (2) GTGGCTTACA TGCACATTTT (2) TGGAACGATA (2) TGGTTGCTGG 455.7 0.4557