| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AACCTGGACA (3) GCCTCCTCAG (2) TGCCACCACT
| 6.5 | 0.0065 |
| Cb medulloblastoma | AACCTGGACA (3) CAGAGCGAGC TGCCACCACT
| 11.5 | 0.0115 |
| P8 GC+1d culture | AACCTGGACA (3) TGCCACCACT
| 3.4 | 0.0034 |
| P8 GC+SHH+1d culture | AACCTGGACA (3) CCCAGAACTC GCCTCCTCAG (2) TGCCACCACT
| 8.3 | 0.0083 |
| 3T3 fibroblasts | AACCTGGACA (3) AGGCAGAGGC (2) TGCCACCACT
| 21 | 0.021 |
| E15 cortex | AGGCAGAGGC (2) GCCTCCTCAG (2) TGCCACCACT
| 19.7 | 0.0197 |
| P1 cortex | AGGCAGAGGC (2) TGCCACCACT
| 9 | 0.009 |
| Hypothalamus | TGCCACCACT
| 7.2 | 0.0072 |
| E12.5 retina | AACCTGGACA (3) AGGCAGAGGC (2) GCCTCCTCAG (2) TGCCACCACT
| 9.5 | 0.0095 |
| E14.5 retina | TGCCACCACT
| 9.1 | 0.0091 |
| E16.5 retina | AACCTGGACA (3) AGGCAGAGGC (2) TGCCACCACT
| 9 | 0.009 |
| E18.5 retina | TGCCACCACT
| 1.8 | 0.0018 |
| P0.5 retina | CAGAGCGAGC CCCAGAACTC TGCCACCACT
| 9.9 | 0.0099 |
| P2.5 retina | GCCTCCTCAG (2) TGCCACCACT
| 7 | 0.007 |
| P4.5 retina | CCCAGAACTC TGCCACCACT
| 7.9 | 0.0079 |
| P6.5 retina | AACCTGGACA (3) TGCCACCACT
| 6.7 | 0.0067 |
| P10.5 crx- retina | AGGCAGAGGC (2) CAGAGCGAGC
| 3.8 | 0.0038 |
| P10.5 crx+ retina | TGCCACCACT
| 1.9 | 0.0019 |
| Adult retinal | TGCCACCACT
| 1.9 | 0.0019 |
| ONL | AACCTGGACA (3) TGCCACCACT
| 5.7 | 0.0057 |