| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | CAAATGATAA CAGCTGGCCA
| 8.1 | 0.0081 |
| Cb medulloblastoma | CAAATGATAA
| 2.3 | 0.0023 |
| P8 GC+1d culture | CAAATGATAA CAGCTGGCCA GCCACTCCCC (3) GCCAGATTGA (2) TATCTTACAG
| 9 | 0.009 |
| P8 GC+SHH+1d culture | CAAATGATAA CAGCTGGCCA GTAATTGAGC
| 4.7 | 0.0047 |
| 3T3 fibroblasts | CAGCTGGCCA GCCAGATTGA (2) GCCATTCCCT (2)
| 31.5 | 0.0315 |
| E15 cortex | CAGCTGGCCA GCCAGATTGA (2) GCCATTCCCT (2) GTAATTGAGC
| 19.6 | 0.0196 |
| P1 cortex | CAAATGATAA GCCATTCCCT (2)
| 18.2 | 0.0182 |
| Hypothalamus | GCCACTCCCC (3) GGATGCAAAG
| 3.6 | 0.0036 |
| E12.5 retina | CAAATGATAA CAGCTGGCCA GCCATTCCCT (2) GTAATTGAGC
| 15.1 | 0.0151 |
| E14.5 retina | CAAATGATAA
| 1.8 | 0.0018 |
| E16.5 retina | CAAATGATAA CAGCTGGCCA GACCGCTTCG GCCAGATTGA (2) GGATGCAAAG GTAATTGAGC TATCTTACAG
| 16.2 | 0.0162 |
| E18.5 retina | CAAATGATAA
| 1.8 | 0.0018 |
| P0.5 retina | CAGCTGGCCA GCCAGATTGA (2) GTAATTGAGC
| 7.9 | 0.0079 |
| P2.5 retina | CAAATGATAA CAGCTGGCCA GCCACTCCCC (3)
| 14.2 | 0.0142 |
| P4.5 retina | CAAATGATAA GCCACTCCCC (3)
| 15.9 | 0.0159 |
| P6.5 retina | CAAATGATAA CAGCTGGCCA
| 6.7 | 0.0067 |
| P10.5 crx- retina | CAAATGATAA CAGCTGGCCA GCCATTCCCT (2)
| 13 | 0.013 |
| P10.5 crx+ retina | CAAATGATAA
| 3.8 | 0.0038 |
| Adult retinal | GTAATTGAGC
| 1.9 | 0.0019 |
| ONL | CAAATGATAA GGATGCAAAG TATCTTACAG
| 13.4 | 0.0134 |