| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | GCTAGTTAAG (2) TGAAAAAAAA (2)
| 29.3 | 0.0293 |
| Cb medulloblastoma | TGAAAAAAAA (2) TTTTTGGGGA (3)
| 80.9 | 0.0809 |
| P8 GC+1d culture | TACTGATTTG (3) TGAAAAAAAA (2) TTTTTGGGGA (3)
| 34.3 | 0.0343 |
| P8 GC+SHH+1d culture | GCTAGTTAAG (2) TGAAAAAAAA (2) TTTTTGGGGA (3)
| 62 | 0.062 |
| 3T3 fibroblasts | TGAAAAAAAA (2)
| 7 | 0.007 |
| E15 cortex | GCTAGTTAAG (2) TGAAAAAAAA (2)
| 34.6 | 0.0346 |
| P1 cortex | TGAAAAAAAA (2)
| 4.5 | 0.0045 |
| Hypothalamus | TGAAAAAAAA (2) TTTTTGGGGA (3)
| 41.6 | 0.0416 |
| E12.5 retina | GCTAGTTAAG (2) TGAAAAAAAA (2)
| 33.8 | 0.0338 |
| E14.5 retina | TGAAAAAAAA (2)
| 49.2 | 0.0492 |
| E16.5 retina | GCTAGTTAAG (2) TACTGATTTG (3) TGAAAAAAAA (2) TTTTTGGGGA (3)
| 23.5 | 0.0235 |
| E18.5 retina | TGAAAAAAAA (2)
| 74.6 | 0.0746 |
| P0.5 retina | GCTAGTTAAG (2) TGAAAAAAAA (2) TTTTTGGGGA (3)
| 27.5 | 0.0275 |
| P2.5 retina | GCTAGTTAAG (2) TGAAAAAAAA (2)
| 44 | 0.044 |
| P4.5 retina | GCTAGTTAAG (2) TACTGATTTG (3) TGAAAAAAAA (2)
| 47.6 | 0.0476 |
| P6.5 retina | GCTAGTTAAG (2) TGAAAAAAAA (2)
| 36.6 | 0.0366 |
| P10.5 crx- retina | GCTAGTTAAG (2) TGAAAAAAAA (2) TTTTTGGGGA (3)
| 13.1 | 0.0131 |
| P10.5 crx+ retina | GCTAGTTAAG (2) TGAAAAAAAA (2)
| 23 | 0.023 |
| Adult retinal | TGAAAAAAAA (2) TTTTTGGGGA (3)
| 14.9 | 0.0149 |
| ONL | GCTAGTTAAG (2) TGAAAAAAAA (2) TTTTTGGGGA (3)
| 24.9 | 0.0249 |