| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | CAGATTTGGG (3) GAATAATGAA GAGACTTGGG (3) GGATGAAAAA GGATGATGAA (3)
| 22.8 | 0.0228 |
| Cb medulloblastoma | GGATGATGAA (3) GGATTAAAAA
| 16.2 | 0.0162 |
| P8 GC+1d culture | GGATGAAAAA GGATGATGAA (3) GGATTAAAAA
| 5.6 | 0.0056 |
| P8 GC+SHH+1d culture | CAGATTTGGG (3) GAATAATGAA GAGACTTGGG (3) GGATGATGAA (3) GGATTAAAAA
| 11.8 | 0.0118 |
| 3T3 fibroblasts | GCTGTGATGT
| 3.5 | 0.0035 |
| E15 cortex | CAGATTTGGG (3) GAGACTTGGG (3) GGATGATGAA (3)
| 29.6 | 0.0296 |
| P1 cortex | GGATGATGAA (3)
| 4.5 | 0.0045 |
| Hypothalamus | CAGATTTGGG (3) GAGACTTGGG (3) GGATGATGAA (3)
| 12.7 | 0.0127 |
| E12.5 retina | GAGACTTGGG (3) GGATGATGAA (3)
| 35.7 | 0.0357 |
| E14.5 retina | GGATGATGAA (3)
| 12.8 | 0.0128 |
| E16.5 retina | ATTACGCCAA GAGACTTGGG (3) GGATGATGAA (3)
| 9 | 0.009 |
| E18.5 retina | CAGACTTGGG GAATAATGAA GGATGAAAAA GGATGATGAA (3)
| 23.6 | 0.0236 |
| P0.5 retina | ATTACGCCAA GAGACTTGGG (3) GGATGATGAA (3)
| 9.9 | 0.0099 |
| P2.5 retina | CAGATTTGGG (3) GAGACTTGGG (3) GCTGTGATGT GGATGATGAA (3)
| 24.7 | 0.0247 |
| P4.5 retina | CAGACTTGGG GGATGATGAA (3) GGATTAAAAA
| 21.8 | 0.0218 |
| P6.5 retina | CAGACTTGGG GGATGATGAA (3) GGATTAAAAA
| 8.4 | 0.0084 |
| P10.5 crx- retina | GCTGTGATGT GGATGATGAA (3)
| 18.6 | 0.0186 |
| P10.5 crx+ retina | GAGACTTGGG (3) GGATGATGAA (3)
| 5.7 | 0.0057 |
| Adult retinal | ATTACGCCAA GCTGTGATGT GGATGATGAA (3)
| 14.8 | 0.0148 |
| ONL | GGATGAAAAA GGATGATGAA (3)
| 3.8 | 0.0038 |