| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | CATTTGCTAG CCAAGAATCT (2) CTGGGTCCAA GAAAATATGA (2) GGTGAAAAAA (2)
| 17.9 | 0.0179 |
| Cb medulloblastoma | CCAAGAATCT (2) GGGAATCACG
| 6.9 | 0.0069 |
| P8 GC+1d culture | CATTTGCTAG CCAAGAATCT (2) CTGGGTCCAA GGGAATCACG GGTGAAAAAA (2)
| 19.3 | 0.0193 |
| P8 GC+SHH+1d culture | CATTTGCTAG CTGGGTCCAA GGGAATCACG
| 14 | 0.014 |
| 3T3 fibroblasts | CCAAGAATCT (2) GGGAATCACG
| 7 | 0.007 |
| E15 cortex | CCAAGAATCT (2) GGGAATCACG GGTGAAAAAA (2)
| 24.7 | 0.0247 |
| P1 cortex | CCAAGAATCT (2)
| 4.5 | 0.0045 |
| Hypothalamus | GGGAATCACG
| 3.6 | 0.0036 |
| E12.5 retina | CATTTGCTAG CCAAGAATCT (2)
| 7.6 | 0.0076 |
| E14.5 retina | CATTTGCTAG CCAAGAATCT (2) GGGAATCACG
| 10.9 | 0.0109 |
| E16.5 retina | CATTTGCTAG CCAAGAATCT (2) GAGCAGATCA (2)
| 7.2 | 0.0072 |
| E18.5 retina | CATTTGCTAG
| 3.6 | 0.0036 |
| P0.5 retina | CCAAGAATCT (2)
| 7.9 | 0.0079 |
| P2.5 retina | CATTTGCTAG CCAAGAATCT (2) GAAAATATGA (2)
| 21.2 | 0.0212 |
| P4.5 retina | CATTTGCTAG CCAAGAATCT (2)
| 6 | 0.006 |
| P6.5 retina | CATTTGCTAG CCAAGAATCT (2) GAAAATATGA (2) GGGAATCACG
| 15.1 | 0.0151 |
| P10.5 crx- retina | GGGAATCACG
| 3.7 | 0.0037 |
| P10.5 crx+ retina | CATTTGCTAG CCAAGAATCT (2)
| 5.7 | 0.0057 |
| Adult retinal | CATTTGCTAG GGGAATCACG
| 5.6 | 0.0056 |
| ONL | CCAAGAATCT (2) GAAAATATGA (2) GGGAATCACG GGTGAAAAAA (2)
| 9.5 | 0.0095 |