| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | GAAGGAAAAA (2) GACACTGGTT (3) GACCCCCCCC
| 4.8 | 0.0048 |
| Cb medulloblastoma | AGGAAAGTGG AGGGAAGTGG GAAGGAAAAA (2) GACCCCCCCC
| 9.2 | 0.0092 |
| P8 GC+1d culture | AGGAAAGTGG GACCCCCCCC
| 6.8 | 0.0068 |
| P8 GC+SHH+1d culture | AGGAAAGTGG CTCACAGGCA (2) GAAGGAAAAA (2) GACACTGGTT (3) GACCCCCCCC GAGTGCAGGA
| 14.2 | 0.0142 |
| 3T3 fibroblasts | GACACTGGTT (3)
| 10.5 | 0.0105 |
| E15 cortex | GAAGGAAAAA (2) GACCCCCCCC
| 44.5 | 0.0445 |
| P1 cortex | AGGAAAGTGG GAAGGAAAAA (2) GACCCCCCCC
| 18.1 | 0.0181 |
| Hypothalamus | AAGACCAGCA AGGAAAGTGG CCGGCAGCCA CTCACAGGCA (2)
| 7.2 | 0.0072 |
| E12.5 retina | AGGAAAGTGG CTCACAGGCA (2) GAAGGAAAAA (2)
| 9.4 | 0.0094 |
| E14.5 retina | AGGAAAGTGG GAAGGAAAAA (2) GACACTGGTT (3)
| 5.4 | 0.0054 |
| E16.5 retina | AAGACCAGCA AGGGAAGTGG GAAGGAAAAA (2) GACACTGGTT (3)
| 9 | 0.009 |
| E18.5 retina | GAAGGAAAAA (2) GACACTGGTT (3) GACCCCCCCC GAGTGCAGGA
| 21.8 | 0.0218 |
| P0.5 retina | AGGAAAGTGG CTCACAGGCA (2) GAAGGAAAAA (2) GACACTGGTT (3)
| 13.8 | 0.0138 |
| P2.5 retina | AGGGAAGTGG CCGGCAGCCA CTCACAGGCA (2) GAAGGAAAAA (2)
| 7.2 | 0.0072 |
| P4.5 retina | AGGGAAGTGG CTCACAGGCA (2) GAAGGAAAAA (2)
| 9.9 | 0.0099 |
| P6.5 retina | CTCACAGGCA (2) GACACTGGTT (3)
| 10 | 0.01 |
| P10.5 crx- retina | AGGAAAGTGG GACCCCCCCC
| 3.8 | 0.0038 |
| P10.5 crx+ retina | AAGACCAGCA CCGGCAGCCA CTCACAGGCA (2) GAAGGAAAAA (2)
| 7.6 | 0.0076 |
| Adult retinal | AGGAAAGTGG CTCACAGGCA (2) GACCCCCCCC
| 11.2 | 0.0112 |
| ONL | AGGAAAGTGG CTCACAGGCA (2) GAAGGAAAAA (2) GAGTGCAGGA
| 9.5 | 0.0095 |