Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.41656	Ppif	peptidylprolyl isomerase F (cyclophilin F)	14		105675
Gene Ontology	extracellular space | isomerase activity | mitochondrion | peptidyl-prolyl cis-trans isomerase activity | protein folding
Human Homolog	PPIF[peptidylprolyl isomerase F (cyclophilin F)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 52 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ACACATCTGA (2) CTGTTCTCAA (2) CTTTTTTCAA (2) TCTTGATTTC (2) 9.8 0.0098 Cb medulloblastoma GCCTCTGCTG (2) GGCACTGTCC TCTTGATTTC (2) 11.5 0.0115 P8 GC+1d culture ACACATCTGA (2) CTGTTCTCAA (2) GCCTCTGCTG (2) GGCACTGTCC TGTGACCTGA 11.4 0.0114 P8 GC+SHH+1d culture CTGTTCTCAA (2) GGCACTGTCC TGTGACCTGA 8.1 0.0081 3T3 fibroblasts CTGTTCTCAA (2) 3.5 0.0035 E15 cortex GGCACTGTCC 14.8 0.0148 P1 cortex CTGTTCTCAA (2) GCCTCTGCTG (2) 9 0.009 Hypothalamus AGGTCAGGCA (2) GCCTCTGCTG (2) TGTGACCTGA 5.4 0.0054 E12.5 retina ACACATCTGA (2) CTGTTCTCAA (2) GGCACTGTCC 5.7 0.0057 E14.5 retina CTGTTCTCAA (2) CTTTTTTCAA (2) GGCACTGTCC TCTTGATTTC (2) 9 0.009 E16.5 retina CTGTTCTCAA (2) 1.8 0.0018 E18.5 retina CTTTTTTCAA (2) GCCTCTGCTG (2) 3.6 0.0036 P0.5 retina ACACATCTGA (2) AGGTCAGGCA (2) CTGTTCTCAA (2) CTTTTTTCAA (2) GGCACTGTCC 15.8 0.0158 P2.5 retina CTGTTCTCAA (2) GGCACTGTCC 8.8 0.0088 P4.5 retina CTGTTCTCAA (2) 4 0.004 P6.5 retina CTTTTTTCAA (2) GCCTCTGCTG (2) GGCACTGTCC 18.3 0.0183 P10.5 crx- retina AGGTCAGGCA (2) CTGTTCTCAA (2) GCCTCTGCTG (2) GGCACTGTCC 18.6 0.0186 P10.5 crx+ retina GCCTCTGCTG (2) GGCACTGTCC 3.8 0.0038 Adult retinal GCCTCTGCTG (2) GGCACTGTCC 3.8 0.0038 ONL TGTGACCTGA 1.9 0.0019