Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.4173	Mtap1b	microtubule-associated protein 1 B	13	13 51.0 cM	17755
Mm.4173	Ddx26	DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26	14		18130
Gene Ontology	ATP binding | ATP dependent helicase activity | extracellular space | nucleic acid binding
Human Homolog	DDX26[DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 152 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAACCAGAGC (2) ACCTTTTTAG (3) ACTCATTTTA ACTTCAATAT (2) ATCAGGAGTG CCCCGCCGCG CGCCCGCCCG (2) GAATTCAAAA (2) GAATTCAAAG GAGACTGTTC (4) GGTTCTCAGT GTGATGCAAG TTTAATTTTT (2) 55.4 0.0554 Cb medulloblastoma ACCTTTTTAG (3) AGGTAAAAGA (3) CACTCACGCA (2) CGCCCGCCCG (2) GAATTCAAAA (2) GAATTCAAAG GTGATGCAAG 46.1 0.0461 P8 GC+1d culture ACCTTTTTAG (3) ACTTCAATAT (2) ATCAGGAGTG CCCCGCCGCG CGCCCGCCCG (2) CGGGAAAGCA (2) GAATTCAAAA (2) GAATTCAAAG GAGACTGTTC (4) GTGATGCAAG TTTAATTTTT (2) 83.1 0.0831 P8 GC+SHH+1d culture ACCTCAATAT ACCTTTTTAG (3) ACTTCAATAT (2) ATCAGGAGTG CCCCGCCGCG CGCCCGCCCG (2) CGGGAAAGCA (2) GAATTCAAAG GAGACTGTTC (4) GGTTCTCAGT GTCAACATAG (2) GTGATGCAAG 94.8 0.0948 3T3 fibroblasts AAACCAGAGC (2) CGCCCGCCCG (2) 7 0.007 E15 cortex AAACCAGAGC (2) CGCCCGCCCG (2) CGGGAAAGCA (2) GAATTCAAAA (2) GAATTCAAAG GTGATGCAAG 227.4 0.2274 P1 cortex AAACCAGAGC (2) ACCTCAATAT ACTTCAATAT (2) ATCAGGAGTG CGCCCGCCCG (2) CGGGAAAGCA (2) GAATTCAAAG GGTTCTCAGT GTGATGCAAG 213.5 0.2135 Hypothalamus ACTCATTTTA ACTTCAATAT (2) CGCCCGCCCG (2) CGGGAAAGCA (2) GGTTCTCAGT GTGATGCAAG 68.7 0.0687 E12.5 retina ACCTCAATAT ACCTTTTTAG (3) ACTTCAATAT (2) AGGTAAAAGA (3) CAGTCTACTT (2) CGCCCGCCCG (2) GAATTCAAAG GAGACTGTTC (4) GGTTCTCAGT GTCAACATAG (2) GTGATGCAAG 52.7 0.0527 E14.5 retina CGGGAAAGCA (2) GAATTCAAAG GTGATGCAAG 20 0.02 E16.5 retina ACCTTTTTAG (3) CACTCACGCA (2) CGGGAAAGCA (2) GAATTCAAAG GTCAACATAG (2) GTGATGCAAG 21.7 0.0217 E18.5 retina ACCTTTTTAG (3) ACTCATTTTA CGCCCGCCCG (2) GGTTCTCAGT GTGATGCAAG 41.8 0.0418 P0.5 retina ACCTTTTTAG (3) ACTTCAATAT (2) CGCCCGCCCG (2) GAATTCAAAG GAGACTGTTC (4) GGTTCTCAGT GTGATGCAAG 29.5 0.0295 P2.5 retina ACCTTTTTAG (3) ACTTCAATAT (2) AGGTAAAAGA (3) CACTCACGCA (2) CGCCCGCCCG (2) CGGGAAAGCA (2) GAATTCAAAG GAGACTGTTC (4) GTCAACATAG (2) GTGATGCAAG TTTAATTTTT (2) 60.1 0.0601 P4.5 retina ACCTTTTTAG (3) ACTTCAATAT (2) CGCCCGCCCG (2) CGGGAAAGCA (2) GAATTCAAAG GTGATGCAAG 67.4 0.0674 P6.5 retina AAACCAGAGC (2) ACCTTTTTAG (3) ATCAGGAGTG CGCCCGCCCG (2) CGGGAAAGCA (2) GAATTCAAAA (2) GAATTCAAAG GTGATGCAAG TTTAATTTTT (2) 78.4 0.0784 P10.5 crx- retina ACCTTTTTAG (3) CGCCCGCCCG (2) GAATTCAAAA (2) GAATTCAAAG GTCAACATAG (2) GTGATGCAAG 61.4 0.0614 P10.5 crx+ retina ACCTTTTTAG (3) CGCCCGCCCG (2) GGTTCTCAGT GTGATGCAAG 94.2 0.0942 Adult retinal AAACCAGAGC (2) ACCTTTTTAG (3) ACTTCAATAT (2) ATCAGGAGTG CACTCACGCA (2) CAGTCTACTT (2) CGCCCGCCCG (2) GAATTCAAAG GGTTCTCAGT GTGATGCAAG 79.9 0.0799 ONL ACCTTTTTAG (3) ACTTCAATAT (2) CGCCCGCCCG (2) CGGGAAAGCA (2) GAATTCAAAG GGTTCTCAGT GTCAACATAG (2) GTGATGCAAG 84.2 0.0842