| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AAACCAAAAA (3) AAACCAGAAA (3) TCTCAAAATT TGCTCTTTAT
| 11.4 | 0.0114 |
| Cb medulloblastoma | AAACCAGAAA (3) AGTTTAAAAA (4)
| 4.6 | 0.0046 |
| P8 GC+1d culture | AAACCAAAAA (3) CTGTGCTCCT TCTCAAAATT TGCTCTTTAT
| 10.1 | 0.0101 |
| P8 GC+SHH+1d culture | AAACCAAAAA (3) CTGGGCTCCT (2) GAGAACACTC (3) TCTCAAAATT TGCTCTTTAT
| 14.1 | 0.0141 |
| 3T3 fibroblasts | CTGGGCTCCT (2)
| 3.5 | 0.0035 |
| P1 cortex | AAACCAAAAA (3)
| 4.5 | 0.0045 |
| Hypothalamus | AAACCAAAAA (3) CTGTGCTCCT GAGAACACTC (3) TGCTCTTTAT
| 19.8 | 0.0198 |
| E12.5 retina | AAACCAAAAA (3) CTGGGCTCCT (2)
| 7.5 | 0.0075 |
| E14.5 retina | GAGAACACTC (3) TGCTCTTTAT
| 9.1 | 0.0091 |
| E16.5 retina | AAACCAAAAA (3) CTGGGCTCCT (2) TGCTCTTTAT
| 7.2 | 0.0072 |
| E18.5 retina | AAACCAAAAA (3) CTGTGCTCCT TGCTCTTTAT
| 16.4 | 0.0164 |
| P0.5 retina | CTGGGCTCCT (2) TGCTCTTTAT
| 4 | 0.004 |
| P2.5 retina | AGTTTAAAAA (4) CTGGGCTCCT (2) CTGTGCTCCT TGCTCTTTAT
| 15.9 | 0.0159 |
| P4.5 retina | TGCTCTTTAT
| 11.9 | 0.0119 |
| P6.5 retina | TGCTCTTTAT
| 1.7 | 0.0017 |
| P10.5 crx- retina | AAACCAGAAA (3) TGCTCTTTAT
| 3.8 | 0.0038 |
| P10.5 crx+ retina | AAACCAGAAA (3) CTGTGCTCCT TGCTCTTTAT
| 7.6 | 0.0076 |
| Adult retinal | AAACCAAAAA (3) CTGGGCTCCT (2) TGCTCTTTAT
| 7.5 | 0.0075 |
| ONL | TCTCAAAATT
| 3.8 | 0.0038 |