Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.4222	Tpi1	triosephosphate isomerase 1	6	6 60.2 cM	21991
Gene Ontology	fatty acid biosynthesis | gluconeogenesis | glycolysis | isomerase activity | lipid biosynthesis | pentose-phosphate shunt | triose-phosphate isomerase activity
Human Homolog	TPI1[triosephosphate isomerase 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 91 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GGGGAAAAGC TAAGGGAAAT (2) 27.7 0.0277 Cb medulloblastoma AGTTTCCAGC GTGCAAATCC TAAGGGAAAT (2) 108.6 0.1086 P8 GC+1d culture CAAAAAATAA (3) GCCAAAACAA GTCTTTGGCA (2) TAAGGGAAAT (2) TAAGGGGAAA 65 0.065 P8 GC+SHH+1d culture GCCAAAACAA GCTTGTGAAC GGGTGGCTCA GTCTTTGGCA (2) TAAGGGAAAT (2) 55.1 0.0551 3T3 fibroblasts ATGGGGGTGG (2) GTGCAAATCC 7 0.007 E15 cortex GCCAAAACAA GTGCAAATCC TAAGGGAAAT (2) TAAGGGGAAA TCTTTGGAGA (2) 29.5 0.0295 P1 cortex GGGGGGGGAA GTGCAAATCC TAAGGGAAAT (2) 31.8 0.0318 Hypothalamus AGACCCTAAG (2) ATGGGGGTGG (2) CAAAAAATAA (3) GCCAAAACAA TAAGGGAAAT (2) TCTTTGGAGA (2) 85.1 0.0851 E12.5 retina CCAAAAATGA (4) GCCAAAACAA TAAGGGAAAT (2) 77 0.077 E14.5 retina CAAAAAATAA (3) CCAAAAATGA (4) GCCAAAACAA GTCTTTGGCA (2) TAAGGGAAAT (2) 76.4 0.0764 E16.5 retina AGACCCTAAG (2) CAAAAAATAA (3) GCCAAAACAA GGGGAAAAGC GTTGGAGCAC (2) TAAGGGAAAT (2) TCTTTGGAGA (2) 101.4 0.1014 E18.5 retina GCCAAAACAA GGGTGGCTCA GTTGGAGCAC (2) TAAGGGAAAT (2) 238.2 0.2382 P0.5 retina AGTTTCCAGC CAAAAAATAA (3) CTTCTGGAGA GCCAAAACAA GGGGGGGGAA TAAGGGAAAT (2) 35.5 0.0355 P2.5 retina CAAAAAATAA (3) GGGGGGGGAA TAAGGGAAAT (2) 95 0.095 P4.5 retina CAAAAAATAA (3) GCCAAAACAA GGGTGGCTCA GTCTTTGGCA (2) TAAGGGAAAT (2) TAAGGGGAAA 150.6 0.1506 P6.5 retina AGACCCTAAG (2) CCAAAAATGA (4) GCCAAAACAA TAAGGGAAAT (2) 71.8 0.0718 P10.5 crx- retina AGACCCTAAG (2) AGTTTCCAGC CCAAAAATGA (4) CTTCTGGAGA GTTGGAGCAC (2) TAAGGGAAAT (2) 80 0.08 P10.5 crx+ retina CCAAAAATGA (4) GCCAAAACAA GCTTGTGAAC GGGGAAAAGC GGGTGGCTCA TAAGGGAAAT (2) TAAGGGGAAA 107.5 0.1075 Adult retinal AGTTTCCAGC ATGGGGGTGG (2) GGGGGGGGAA GGGTGGCTCA GTTGGAGCAC (2) TAAGGGAAAT (2) 44.6 0.0446 ONL GCTTGTGAAC GGGTGGCTCA TAAGGGAAAT (2) 28.7 0.0287