Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.42258	Lztfl1	leucine zipper transcription factor-like 1	9	9 F (9 71.1 cM)	93730
Mm.42258	Ccr9	chemokine (C-C motif) receptor 9	9	9 71.2 cM	12769
Gene Ontology	C-C chemokine receptor activity | chemotaxis | defense response | G-protein coupled receptor activity | G-protein coupled receptor protein signaling pathway | integral to membrane | protein binding | rhodopsin-like receptor activity
Human Homolog	CCR9[chemokine (C-C motif) receptor 9] | CCR9[chemokine (C-C motif) receptor 9]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 4 In Situ Hybridization Images

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SAGE Tags

Total 21 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  Cb medulloblastoma CTGATCATCA TACATACTCC (4) 4.6 0.0046 P8 GC+1d culture AAATAAAAAT (3) CTGATCATCA 2.2 0.0022 E15 cortex GAGAAGGCAC (2) 4.9 0.0049 Hypothalamus AAATAAAAAT (3) TACATACTCC (4) 5.4 0.0054 E12.5 retina CTGATCATCA 1.9 0.0019 E16.5 retina AAATAAAAAT (3) CTGATCATCA GAGAAGGCAC (2) 5.4 0.0054 P2.5 retina AAATAAAAAT (3) CTGATCATCA 3.6 0.0036 P4.5 retina AAATAAAAAT (3) GAGAAGGCAC (2) 6 0.006 P6.5 retina AAATAAAAAT (3) 1.7 0.0017 P10.5 crx- retina AAATAAAAAT (3) 1.9 0.0019 Adult retinal CTGATCATCA GAGAAGGCAC (2) 3.8 0.0038 ONL AAATAAAAAT (3) CTGATCATCA 13.4 0.0134