Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.42829	Sepw1	selenoprotein W, muscle 1	7		20364
Gene Ontology	selenium binding
Human Homolog	SEPW1[selenoprotein W, 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 172 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAGGAAAGGC (2) ACAGGAAGGA AGTTCCCCGG GACGCCAGGG GCTGCCTGTC GCTTAAAAAT GTGGCTCGCC TTCTTGGGGA (2) TTTCCAGGGT TTTCCAGGTG TTTTCAGTGT (2) TTTTCCAGGT 111 0.111 Cb medulloblastoma ACAGGAAGGA GACGCCAGGG GCTGCCTGTC GCTTAAAAAT GTGGCTCGCC TGACATTTTA (3) TTCTTGGGGA (2) TTTCCAGGTG 145.6 0.1456 P8 GC+1d culture AAGGAAAGGC (2) ACAGGAAGGA AGTTCCCCGG GACGCCAGGG GCTGCCTGTC GCTTAAAAAT GTGGCTCGCC TTCTTGGGGA (2) TTTCCAGGGT TTTCCAGGTG TTTTCAGTGT (2) TTTTCCAGGT 147.2 0.1472 P8 GC+SHH+1d culture AAGGAAAGGC (2) ACAGGAAGGA GACGCCAGGG GCTGCCTGTC GCTTAAAAAT GTGGCTCGCC TTTCCAGGTG TTTTCAGTGT (2) TTTTCCAGGT 107.8 0.1078 3T3 fibroblasts ACAGGAAGGA GACGCCAGGG TTTCCAGGTG 31.5 0.0315 E15 cortex ACAGGAAGGA GACGCCAGGG GTGGCTCGCC TTCTTGGGGA (2) TTTCCAGGTG 69.1 0.0691 P1 cortex ACAGGAAGGA GACGCCAGGG TTCTTGGGGA (2) TTTCCAGGTG TTTCCCAGGT TTTTCAGTGT (2) 81.7 0.0817 Hypothalamus ACAGGAAGGA AGTTCCCCGG GCTGCCTGTC GCTTAAAAAT TTCCAGGTGT TTTACAGGTG TTTCCAGGTG TTTCCCAGGT TTTTCAGTGT (2) 164.7 0.1647 E12.5 retina AAGGAAAGGC (2) GACGCCAGGG GCTTAAAAAT TTCCAGGTGT TTCTTGGGGA (2) TTTACAGGTG TTTCCAGGGT TTTCCAGGTG TTTTCAGTGT (2) TTTTCCAGGT 105.4 0.1054 E14.5 retina AAGGAAAGGC (2) GACGCCAGGG GCTGCCTGTC GCTTAAAAAT TTCTTGGGGA (2) TTTACAGGTG TTTCCAGGTG TTTTCCAGGT 127.5 0.1275 E16.5 retina AAGGAAAGGC (2) ACAGGAAGGA AGTTCCCCGG GACGCCAGGG GCTGCCTGTC GCTTAAAAAT GTGGCTCGCC TTCCAGGTGT TTCTTGGGGA (2) TTTACAGGTG TTTCCAGGGG TTTCCAGGTG 173.7 0.1737 E18.5 retina AAGGAAAGGC (2) ACAGGAAGGA GACGCCAGGG GCTGCCTGTC GCTTAAAAAT TTCTTGGGGA (2) TTTCCAGGGG TTTCCAGGTG 165.5 0.1655 P0.5 retina AAGGAAAGGC (2) ACAGGAAGGA GACGCCAGGG GCTTAAAAAT GTGGCTCGCC TTTCCAGGGG TTTCCAGGTG TTTTCAGTGT (2) 100.2 0.1002 P2.5 retina AAGGAAAGGC (2) ACAGGAAGGA GACGCCAGGG GCTGCCTGTC GCTTAAAAAT TTCCAGGTGT TTCTTGGGGA (2) TTTCCAGGTG TTTTCCAGGT 155 0.155 P4.5 retina AAGGAAAGGC (2) GACGCCAGGG GCTTAAAAAT GTGGCTCGCC TGACATTTTA (3) TTCTTGGGGA (2) TTTCCAGGTG TTTCCAGTGT (3) TTTCCCAGGT 138.8 0.1388 P6.5 retina AAGGAAAGGC (2) ACAGGAAGGA GACGCCAGGG GCTGCCTGTC GCTTAAAAAT GTGGCTCGCC TTCTTGGGGA (2) TTTCCAGGTG TTTCCAGTGT (3) TTTTCAGTGT (2) 136.9 0.1369 P10.5 crx- retina AAGGAAAGGC (2) ACAGGAAGGA AGTTCCCCGG GACGCCAGGG GCTGCCTGTC GCTTAAAAAT GTGGCTCGCC TTCTTGGGGA (2) TTTCCAGGTG TTTCCAGTGT (3) TTTTCCAGGT 94.9 0.0949 P10.5 crx+ retina ACAGGAAGGA GACGCCAGGG GCTGCCTGTC GTGGCTCGCC TGACATTTTA (3) TTCTTGGGGA (2) TTTCCAGGTG 90.2 0.0902 Adult retinal ACAGGAAGGA GACGCCAGGG GCTGCCTGTC GCTTAAAAAT TTCTTGGGGA (2) TTTCCAGGGT TTTCCAGGTG TTTCCCAGGT 52.1 0.0521 ONL ACAGGAAGGA GACGCCAGGG GCTGCCTGTC GCTTAAAAAT GTGGCTCGCC TTCTTGGGGA (2) TTTCCAGGTG TTTTCAGTGT (2) 68.9 0.0689